=>> Building biology/py-scikit-bio build started at Tue May 6 22:24:18 BST 2025 port directory: /usr/ports/biology/py-scikit-bio package name: py311-scikit-bio-0.6.3 building for: FreeBSD pkg-builder.dan.net.uk 14.2-RELEASE FreeBSD 14.2-RELEASE amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 2532 Jan 27 13:48 /usr/ports/biology/py-scikit-bio/Makefile Ports top last git commit: 5529c5919b Ports top unclean checkout: yes Port dir last git commit: 08fa8f9c4b Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1402000 Jail OSVERSION: 1402000 Job Id: 05 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1402000 UNAME_v=FreeBSD 14.2-RELEASE UNAME_r=14.2-RELEASE BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/14-amd64-default-dan/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/14-amd64-default-dan/05/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=14-amd64-default-dan SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/14-amd64-default-dan/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/.cache HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/.cache HOME=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/scikit-bio" EXAMPLESDIR="share/examples/scikit-bio" DATADIR="share/scikit-bio" WWWDIR="www/scikit-bio" ETCDIR="etc/scikit-bio" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/scikit-bio DOCSDIR=/usr/local/share/doc/scikit-bio EXAMPLESDIR=/usr/local/share/examples/scikit-bio WWWDIR=/usr/local/www/scikit-bio ETCDIR=/usr/local/etc/scikit-bio --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### CCACHE_CPP2=1 WITH_SSP_PORTS=yes WITH_SSP=yes #WITH_LTO=yes DISABLE_LICENSES=yes LICENSES_ACCEPTED=AGPLv3 APACHE10 APACHE11 APACHE20 ART10 ARTPERL10 ART20 BSD BSD2CLAUSE BSD3CLAUSE BSD4CLAUSE BSL CC0-1.0 CDDL ClArtistic EPL GFDL GMGPL GPLv1 GPLv2 GPLv3 GPLv3RLE ISCL LGPL20 LGPL21 LGPL3 LPPL10 LPPL11 LPPL12 LPPL13 LPPL13a LPPL13b LPPL13c MIT MPL OpenSSL OFL10 OFL11 OWL PostgreSQL PHP202 PHP30 PHP301 PSFL RUBY ZLIB ZPL21 SVM-Light EULA ALASIR Microsoft-exFAT SIMIAN UDEVGAME unknown MTA COMMERCIAL teamspeak NO_LICENSES_DIALOGS=yes #### #### NO_IGNORE=yes DEFAULT_VERSIONS+=ssl=openssl apache=2.4 imagemagick=7 java=21 linux=c7 mysql=8.0 php=8.3 samba=4.19 varnish=7 WITH_SETID_MODE=force PHP_ZTS=enabled OPTIONS_UNSET+=OPENJPEG OPTIONS_UNSET+=GSSAPI_BASE OPTIONS_SET+=ZTS OPTIONS_SET+=GSSAPI_NONE ALLOW_UNSUPPORTED_SYSTEM=yes WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-scikit-bio-0.6.3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.1.2.pkg [pkg-builder.dan.net.uk] Installing pkg-2.1.2... [pkg-builder.dan.net.uk] Extracting pkg-2.1.2: .......... done ===> py311-scikit-bio-0.6.3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-scikit-bio-0.6.3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-scikit-bio-0.6.3 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-scikit-bio-0.6.3 for building => SHA256 Checksum OK for scikit-bio-0.6.3.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-scikit-bio-0.6.3 for building ===> Extracting for py311-scikit-bio-0.6.3 => SHA256 Checksum OK for scikit-bio-0.6.3.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-scikit-bio-0.6.3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-scikit-bio-0.6.3 depends on package: py311-numpy>=1.16,1<1.27,1 - not found ===> Installing existing package /packages/All/py311-numpy-1.26.4_6,1.pkg [pkg-builder.dan.net.uk] Installing py311-numpy-1.26.4_6,1... [pkg-builder.dan.net.uk] `-- Installing gcc13-13.3.0_2... [pkg-builder.dan.net.uk] | `-- Installing binutils-2.44,1... [pkg-builder.dan.net.uk] | | `-- Installing indexinfo-0.3.1_1... [pkg-builder.dan.net.uk] | | `-- Extracting indexinfo-0.3.1_1: . done [pkg-builder.dan.net.uk] | | `-- Installing zstd-1.5.7... [pkg-builder.dan.net.uk] | | `-- Installing liblz4-1.10.0,1... [pkg-builder.dan.net.uk] | | `-- Extracting liblz4-1.10.0,1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting zstd-1.5.7: .......... done [pkg-builder.dan.net.uk] | `-- Extracting binutils-2.44,1: .......... done [pkg-builder.dan.net.uk] | `-- Installing gmp-6.3.0... [pkg-builder.dan.net.uk] | `-- Extracting gmp-6.3.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing mpc-1.3.1_1... [pkg-builder.dan.net.uk] | | `-- Installing mpfr-4.2.2,1... 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[pkg-builder.dan.net.uk] | | `-- Extracting suitesparse-colamd-3.3.4: .......... done [pkg-builder.dan.net.uk] | `-- Extracting suitesparse-cholmod-5.3.2: .......... done [pkg-builder.dan.net.uk] `-- Extracting suitesparse-umfpack-6.3.5_1: .......... done [pkg-builder.dan.net.uk] Extracting py311-numpy-1.26.4_6,1: .......... done ===== Message from gcc13-13.3.0_2: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from python311-3.11.12: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-scikit-bio-0.6.3 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-setuptools>0 - not found ===> Installing existing package /packages/All/py311-setuptools-63.1.0_3.pkg [pkg-builder.dan.net.uk] Installing py311-setuptools-63.1.0_3... [pkg-builder.dan.net.uk] Extracting py311-setuptools-63.1.0_3: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-setuptools>0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-wheel>0 - not found ===> Installing existing package /packages/All/py311-wheel-0.45.1.pkg [pkg-builder.dan.net.uk] Installing py311-wheel-0.45.1... [pkg-builder.dan.net.uk] Extracting py311-wheel-0.45.1: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-wheel>0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-cython>=0.29.37<3 - not found ===> Installing existing package /packages/All/py311-cython-0.29.37_2.pkg [pkg-builder.dan.net.uk] Installing py311-cython-0.29.37_2... [pkg-builder.dan.net.uk] Extracting py311-cython-0.29.37_2: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-cython>=0.29.37<3 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on file: /usr/local/bin/python3.11 - found ===> py311-scikit-bio-0.6.3 depends on package: py311-build>=0 - not found ===> Installing existing package /packages/All/py311-build-1.2.2_2.pkg [pkg-builder.dan.net.uk] Installing py311-build-1.2.2_2... [pkg-builder.dan.net.uk] `-- Installing py311-packaging-24.2... [pkg-builder.dan.net.uk] `-- Extracting py311-packaging-24.2: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pyproject-hooks-1.2.0... [pkg-builder.dan.net.uk] `-- Extracting py311-pyproject-hooks-1.2.0: .......... done [pkg-builder.dan.net.uk] Extracting py311-build-1.2.2_2: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-build>=0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-installer>=0 - not found ===> Installing existing package /packages/All/py311-installer-0.7.0.pkg [pkg-builder.dan.net.uk] Installing py311-installer-0.7.0... [pkg-builder.dan.net.uk] Extracting py311-installer-0.7.0: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-installer>=0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on file: /usr/local/bin/ccache - not found ===> Installing existing package /packages/All/ccache-3.7.12_8.pkg [pkg-builder.dan.net.uk] Installing ccache-3.7.12_8... [pkg-builder.dan.net.uk] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc13 create symlink for gcc13 (world) create symlink for g++13 create symlink for g++13 (world) create symlink for cpp13 create symlink for cpp13 (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> py311-scikit-bio-0.6.3 depends on file: /usr/local/bin/ccache - found ===> Returning to build of py311-scikit-bio-0.6.3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-scikit-bio-0.6.3 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-scikit-bio-0.6.3 * Getting build dependencies for wheel... /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/alignment/_ssw_wrapper.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/diversity/_phylogenetic.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/metadata/_intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/stats/distance/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/stats/ordination/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: skbio/tree/_c_me.pyx:863:49: Index should be typed for more efficient access /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/tree/_c_nj.pyx tree = Parsing.p_module(s, pxd, full_module_name) [1/7] Cythonizing skbio/alignment/_ssw_wrapper.pyx [2/7] Cythonizing skbio/diversity/_phylogenetic.pyx [3/7] Cythonizing skbio/metadata/_intersection.pyx [4/7] Cythonizing skbio/stats/distance/_cutils.pyx [5/7] Cythonizing skbio/stats/ordination/_cutils.pyx [6/7] Cythonizing skbio/tree/_c_me.pyx [7/7] Cythonizing skbio/tree/_c_nj.pyx running egg_info writing scikit_bio.egg-info/PKG-INFO writing dependency_links to scikit_bio.egg-info/dependency_links.txt writing requirements to scikit_bio.egg-info/requires.txt writing top-level names to scikit_bio.egg-info/top_level.txt reading manifest file 'scikit_bio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'doc/build' no previously-included directories found matching 'doc/source/generated' no previously-included directories found matching 'web/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution warning: no previously-included files matching '.coverage' found anywhere in distribution adding license file 'LICENSE.txt' writing manifest file 'scikit_bio.egg-info/SOURCES.txt' * Building wheel... /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/alignment/_ssw_wrapper.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/diversity/_phylogenetic.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/metadata/_intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/stats/distance/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/stats/ordination/_cutils.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: skbio/tree/_c_me.pyx:863:49: Index should be typed for more efficient access /usr/local/lib/python3.11/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/skbio/tree/_c_nj.pyx tree = Parsing.p_module(s, pxd, full_module_name) [1/7] Cythonizing skbio/alignment/_ssw_wrapper.pyx [2/7] Cythonizing skbio/diversity/_phylogenetic.pyx [3/7] Cythonizing skbio/metadata/_intersection.pyx [4/7] Cythonizing skbio/stats/distance/_cutils.pyx [5/7] Cythonizing skbio/stats/ordination/_cutils.pyx [6/7] Cythonizing skbio/tree/_c_me.pyx [7/7] Cythonizing skbio/tree/_c_nj.pyx running bdist_wheel running build running build_py creating build creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311 creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio copying skbio/workflow.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio copying skbio/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio copying skbio/_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio copying skbio/test.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/_warning.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/_docstring.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/_misc.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/_testing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/_plotting.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/_exception.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util copying skbio/util/_decorator.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment copying skbio/alignment/_repr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment copying skbio/alignment/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment copying skbio/alignment/_tabular_msa.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment copying skbio/alignment/_indexing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment copying skbio/alignment/_path.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment copying skbio/alignment/_pairwise.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats copying skbio/stats/gradient.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats copying skbio/stats/_misc.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats copying skbio/stats/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats copying skbio/stats/power.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats copying skbio/stats/composition.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats copying skbio/stats/_subsample.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tests copying skbio/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tests copying skbio/tests/test_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tests copying skbio/tests/test_workflow.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_nucleotide_mixin.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_genetic_code.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_repr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_substitution.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_protein.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_alphabet.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/distance.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_dna.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_sequence.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_grammared_sequence.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence copying skbio/sequence/_rna.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity copying skbio/diversity/_util.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity copying skbio/diversity/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity copying skbio/diversity/_driver.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity copying skbio/diversity/_block.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io copying skbio/io/_warning.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io copying skbio/io/_fileobject.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io copying skbio/io/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io copying skbio/io/registry.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io copying skbio/io/util.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io copying skbio/io/_exception.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io copying skbio/io/_iosources.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_upgma.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_utils.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_majority_rule.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_nj.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_tree.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_exception.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_me.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree copying skbio/tree/_compare.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding copying skbio/embedding/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding copying skbio/embedding/_protein.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding copying skbio/embedding/_embedding.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/_interval.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/_repr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/_enan.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/_testing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/io.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/_metadata.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/_mixin.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata copying skbio/metadata/missing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table copying skbio/table/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table copying skbio/table/_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests copying skbio/util/tests/test_misc.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests copying skbio/util/tests/test_docstring.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests copying skbio/util/tests/test_testing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests copying skbio/util/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests copying skbio/util/tests/test_plotting.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests copying skbio/util/tests/test_warning.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests copying skbio/util/tests/test_decorator.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests copying skbio/alignment/tests/test_path.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests copying skbio/alignment/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests copying skbio/alignment/tests/test_pairwise.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests copying skbio/alignment/tests/test_ssw.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_lib copying skbio/alignment/_lib/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_lib creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve copying skbio/stats/evolve/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve copying skbio/stats/evolve/_hommola.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/_permanova.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/_utils.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/_bioenv.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/_mantel.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/_anosim.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance copying skbio/stats/distance/_permdisp.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination copying skbio/stats/ordination/_ordination_results.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination copying skbio/stats/ordination/_utils.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination copying skbio/stats/ordination/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests copying skbio/stats/tests/test_misc.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests copying skbio/stats/tests/test_gradient.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests copying skbio/stats/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests copying skbio/stats/tests/test_subsample.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests copying skbio/stats/tests/test_power.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests copying skbio/stats/tests/test_composition.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve/tests copying skbio/stats/evolve/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve/tests copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_permanova.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests copying skbio/stats/distance/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_mantel.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests copying skbio/stats/distance/tests/test_anosim.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_util.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_alphabet.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_substitution.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_distance.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_sequence.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_dna.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_rna.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_genetic_code.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests copying skbio/sequence/tests/test_protein.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests copying skbio/diversity/tests/test_util.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests copying skbio/diversity/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests copying skbio/diversity/tests/test_driver.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests copying skbio/diversity/tests/test_block.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha copying skbio/diversity/alpha/_ace.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha copying skbio/diversity/alpha/_lladser.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha copying skbio/diversity/alpha/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha copying skbio/diversity/alpha/_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha copying skbio/diversity/alpha/_chao1.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha copying skbio/diversity/alpha/_gini.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha copying skbio/diversity/alpha/_pd.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta copying skbio/diversity/beta/_unifrac.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta copying skbio/diversity/beta/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_pd.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests copying skbio/diversity/beta/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests copying skbio/io/tests/test_util.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests copying skbio/io/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests copying skbio/io/tests/test_iosources.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests copying skbio/io/tests/test_registry.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/fastq.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/lsmat.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/qseq.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/taxdump.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/phylip.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/biom.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/_blast.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/blast7.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/binary_dm.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/embed.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/gff3.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/emptyfile.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/ordination.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/genbank.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/sample_metadata.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/clustal.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/fasta.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/embl.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/stockholm.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/newick.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format copying skbio/io/format/blast6.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_fastq.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_gff3.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_phylip.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_stockholm.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_ordination.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_binary_dm.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_lsmat.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_blast6.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_qseq.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_taxdump.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_clustal.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_embl.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_genbank.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_sample_metadata.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_embed.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_biom.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_fasta.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_newick.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_blast7.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests copying skbio/io/format/tests/test_emptyfile.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests copying skbio/tree/tests/test_compare.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests copying skbio/tree/tests/test_upgma.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests copying skbio/tree/tests/test_me.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests copying skbio/tree/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests copying skbio/tree/tests/test_tree.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests copying skbio/tree/tests/test_majority_rule.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests copying skbio/tree/tests/test_nj.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests copying skbio/embedding/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests copying skbio/embedding/tests/test_embedding.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests copying skbio/embedding/tests/test_protein.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_io.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_mixin.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_missing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_interval.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_enan.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_metadata_column.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_metadata.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests copying skbio/metadata/tests/test_intersection.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table/tests copying skbio/table/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table/tests copying skbio/table/tests/test_base.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/vr_real_raw -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/vr_raw -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/cr_data_raw -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/vr_out -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/vr_real_out -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/cr_no_data_out -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data copying skbio/stats/tests/data/cr_data_out -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/frameSeries_dm.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/df.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_X -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_X -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/big5_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/example_file.gz -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/example_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/big5_file.bz2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/example_file.bz2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/big5_file.gz -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/real_file_2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data copying skbio/io/tests/data/real_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/tiny_embedding_file.npz -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embed2.txt.npy -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_dna -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/taxdump_names.dmp -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sample-metadata-comments.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/whitespace_only -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error8 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error9 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error4 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error5 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error6 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error7 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error3 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_single_record -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error24 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error23 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error22 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error21 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error20 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/taxdump_nodes.dmp -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error12 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error13 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error10 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error11 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error16 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error17 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error14 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error15 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error18 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_error19 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_constructed -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embed1.txt.npy -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_multi_seq_spaces -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/prot.emb -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_multi_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/pdb_hits.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_single_record -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sample-metadata-empty-rows.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/prot_vec.emb -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_rna -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/empty -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests/data copying skbio/embedding/tests/data/embed1.txt.npy -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/invalid-header.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/directive-before-header.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/header-only.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/empty-file -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/empty-column-name.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/non-utf-8.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid copying skbio/metadata/tests/data/invalid/empty-id.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/override-insdc.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/non-standard-characters.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/single-column.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/simple.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/simple-with-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/empty-types-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/numeric-column.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/simple.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/complete-types-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/windows-line-endings.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/jagged.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/trailing-columns.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/BOM-simple.txt -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/missing-data.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/mac-line-endings.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/recommended-ids.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/qiime1.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/no-columns.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/partial-types-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/unix-line-endings.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/minimal.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/all-cells-padded.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/empty-rows.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/missing-insdc.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/single-id.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/comments.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/column-order.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid copying skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid running build_ext building 'skbio.metadata._intersection' extension creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311 creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/metadata/_intersection.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_intersection.o skbio/metadata/_intersection.c:11813:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 11813 | CYTHON_FALLTHROUGH; | ^ skbio/metadata/_intersection.c:358:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 358 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/metadata/_intersection.c:11824:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 11824 | CYTHON_FALLTHROUGH; | ^ skbio/metadata/_intersection.c:358:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 358 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/metadata/_intersection.c:12120:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 12120 | CYTHON_FALLTHROUGH; | ^ skbio/metadata/_intersection.c:358:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 358 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/metadata/_intersection.c:12131:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 12131 | CYTHON_FALLTHROUGH; | ^ skbio/metadata/_intersection.c:358:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 358 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ 4 warnings generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_intersection.o -L/usr/local/lib -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_intersection.cpython-311.so building 'skbio.alignment._ssw_wrapper' extension creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_lib cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -Iskbio/alignment -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/alignment/_lib/ssw.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_lib/ssw.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -Iskbio/alignment -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/alignment/_ssw_wrapper.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_ssw_wrapper.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP In file included from skbio/alignment/_ssw_wrapper.c:783: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ skbio/alignment/_ssw_wrapper.c:11948:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 11948 | CYTHON_FALLTHROUGH; | ^ skbio/alignment/_ssw_wrapper.c:375:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 375 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/alignment/_ssw_wrapper.c:11959:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 11959 | CYTHON_FALLTHROUGH; | ^ skbio/alignment/_ssw_wrapper.c:375:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 375 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ 3 warnings generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_lib/ssw.o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_ssw_wrapper.o -L/usr/local/lib -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_ssw_wrapper.cpython-311.so building 'skbio.tree._c_nj' extension creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/tree/_c_nj.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_nj.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp skbio/tree/_c_nj.c:18856:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 18856 | CYTHON_FALLTHROUGH; | ^ skbio/tree/_c_nj.c:367:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 367 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/tree/_c_nj.c:18867:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 18867 | CYTHON_FALLTHROUGH; | ^ skbio/tree/_c_nj.c:367:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 367 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ 2 warnings generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_nj.o -L/usr/local/lib -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_nj.cpython-311.so -fopenmp building 'skbio.tree._c_me' extension cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/tree/_c_me.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_me.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp skbio/tree/_c_me.c:10670:25: warning: code will never be executed [-Wunreachable-code] 10670 | if ((1 == 0)) abort(); | ^~~~~ skbio/tree/_c_me.c:10670:16: note: silence by adding parentheses to mark code as explicitly dead 10670 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/tree/_c_me.c:10213:23: warning: code will never be executed [-Wunreachable-code] 10213 | if ((1 == 0)) abort(); | ^~~~~ skbio/tree/_c_me.c:10213:14: note: silence by adding parentheses to mark code as explicitly dead 10213 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/tree/_c_me.c:9876:25: warning: code will never be executed [-Wunreachable-code] 9876 | if ((1 == 0)) abort(); | ^~~~~ skbio/tree/_c_me.c:9876:16: note: silence by adding parentheses to mark code as explicitly dead 9876 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/tree/_c_me.c:33177:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 33177 | CYTHON_FALLTHROUGH; | ^ skbio/tree/_c_me.c:373:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 373 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/tree/_c_me.c:33188:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 33188 | CYTHON_FALLTHROUGH; | ^ skbio/tree/_c_me.c:373:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 373 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ 5 warnings generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_me.o -L/usr/local/lib -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_me.cpython-311.so -fopenmp building 'skbio.diversity._phylogenetic' extension creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/diversity/_phylogenetic.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/_phylogenetic.o In file included from skbio/diversity/_phylogenetic.c:774: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ 1 warning generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/_phylogenetic.o -L/usr/local/lib -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/_phylogenetic.cpython-311.so building 'skbio.stats.ordination._cutils' extension creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/stats/ordination/_cutils.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp skbio/stats/ordination/_cutils.c:3258:23: warning: code will never be executed [-Wunreachable-code] 3258 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/ordination/_cutils.c:3258:14: note: silence by adding parentheses to mark code as explicitly dead 3258 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/ordination/_cutils.c:3797:23: warning: code will never be executed [-Wunreachable-code] 3797 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/ordination/_cutils.c:3797:14: note: silence by adding parentheses to mark code as explicitly dead 3797 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/ordination/_cutils.c:4822:24: warning: code will never be executed [-Wunreachable-code] 4822 | if ((24 == 0)) abort(); | ^~~~~ skbio/stats/ordination/_cutils.c:4822:14: note: silence by adding parentheses to mark code as explicitly dead 4822 | if ((24 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/ordination/_cutils.c:5184:24: warning: code will never be executed [-Wunreachable-code] 5184 | if ((24 == 0)) abort(); | ^~~~~ skbio/stats/ordination/_cutils.c:5184:14: note: silence by adding parentheses to mark code as explicitly dead 5184 | if ((24 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/ordination/_cutils.c:23733:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 23733 | CYTHON_FALLTHROUGH; | ^ skbio/stats/ordination/_cutils.c:367:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 367 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/stats/ordination/_cutils.c:23744:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 23744 | CYTHON_FALLTHROUGH; | ^ skbio/stats/ordination/_cutils.c:367:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 367 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ 6 warnings generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_cutils.o -L/usr/local/lib -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_cutils.cpython-311.so -fopenmp building 'skbio.stats.distance._cutils' extension creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -I/usr/local/lib/python3.11/site-packages/numpy/core/include -I/usr/local/include/python3.11 -c skbio/stats/distance/_cutils.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp In file included from skbio/stats/distance/_cutils.c:774: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ skbio/stats/distance/_cutils.c:3808:24: warning: code will never be executed [-Wunreachable-code] 3808 | if ((24 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:3808:14: note: silence by adding parentheses to mark code as explicitly dead 3808 | if ((24 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:4172:24: warning: code will never be executed [-Wunreachable-code] 4172 | if ((24 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:4172:14: note: silence by adding parentheses to mark code as explicitly dead 4172 | if ((24 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:5154:23: warning: code will never be executed [-Wunreachable-code] 5154 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:5154:14: note: silence by adding parentheses to mark code as explicitly dead 5154 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:5481:23: warning: code will never be executed [-Wunreachable-code] 5481 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:5481:14: note: silence by adding parentheses to mark code as explicitly dead 5481 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:6321:23: warning: code will never be executed [-Wunreachable-code] 6321 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:6321:14: note: silence by adding parentheses to mark code as explicitly dead 6321 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:6631:23: warning: code will never be executed [-Wunreachable-code] 6631 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:6631:14: note: silence by adding parentheses to mark code as explicitly dead 6631 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:7588:23: warning: code will never be executed [-Wunreachable-code] 7588 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:7588:14: note: silence by adding parentheses to mark code as explicitly dead 7588 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:8131:23: warning: code will never be executed [-Wunreachable-code] 8131 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:8131:14: note: silence by adding parentheses to mark code as explicitly dead 8131 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:9118:23: warning: code will never be executed [-Wunreachable-code] 9118 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:9118:14: note: silence by adding parentheses to mark code as explicitly dead 9118 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:9761:23: warning: code will never be executed [-Wunreachable-code] 9761 | if ((1 == 0)) abort(); | ^~~~~ skbio/stats/distance/_cutils.c:9761:14: note: silence by adding parentheses to mark code as explicitly dead 9761 | if ((1 == 0)) abort(); | ^ | /* DISABLES CODE */ ( ) skbio/stats/distance/_cutils.c:31969:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 31969 | CYTHON_FALLTHROUGH; | ^ skbio/stats/distance/_cutils.c:367:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 367 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ skbio/stats/distance/_cutils.c:31980:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough] 31980 | CYTHON_FALLTHROUGH; | ^ skbio/stats/distance/_cutils.c:367:34: note: expanded from macro 'CYTHON_FALLTHROUGH' 367 | #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) | ^ 13 warnings generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_cutils.o -L/usr/local/lib -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_cutils.cpython-311.so -fopenmp installing to build/bdist.freebsd-14.2-RELEASE-amd64/wheel running install running install_lib creating build/bdist.freebsd-14.2-RELEASE-amd64 creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/workflow.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/_warning.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/_docstring.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/_misc.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests/test_misc.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests/test_docstring.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests/test_testing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests/test_plotting.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests/test_warning.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/tests/test_decorator.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/_testing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/_plotting.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/_exception.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/util/_decorator.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/util creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_repr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests/test_path.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests/test_tabular_msa.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests/test_pairwise.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/tests/test_ssw.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_ssw_wrapper.cpython-311.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_tabular_msa.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_indexing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_lib/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment/_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_path.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/alignment/_pairwise.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/alignment creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/evolve creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/evolve/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/evolve/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve/tests/test_hommola.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/evolve/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/evolve copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/evolve/_hommola.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/evolve creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_permanova.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_utils.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/test_permanova.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/test_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/test_permdisp.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/test_mantel.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/test_bioenv.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/test_anosim.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/frameSeries_dm.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/dm4.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/dm3.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/exp_results.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/df.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/dm_reordered.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/dm.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/dm2.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/df_extra_column.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_bioenv.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_cutils.cpython-311.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_mantel.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_anosim.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/distance/_permdisp.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/distance copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/gradient.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/_misc.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_ordination_results.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_utils.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/test_util.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/test_ordination_results.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/varechem.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/varespec.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_Y -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_X -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_X -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_Y -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/L&L_CA_data -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_skbio -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_redundancy_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_cutils.cpython-311.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_principal_coordinate_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/ordination/_correspondence_analysis.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/ordination creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/test_misc.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/test_gradient.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/test_subsample.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/test_power.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/test_composition.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/vr_real_raw -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/vr_raw -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/cr_data_raw -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/cr_no_data_raw -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/gr_wo_msg_raw -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/vr_out -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/gr_wo_msg_out -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/vr_real_out -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/cr_no_data_out -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/gr_w_msg_out -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/gr_w_msg_raw -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/tests/data/cr_data_out -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/power.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/composition.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/stats/_subsample.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/stats creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tests/test_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tests/test_workflow.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_nucleotide_mixin.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_genetic_code.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_repr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_alphabet.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_substitution.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_grammared_sequence.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_distance.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_sequence.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_nucleotide_sequences.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_dna.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_rna.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_genetic_code.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/tests/test_protein.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_substitution.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_protein.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_alphabet.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/distance.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_dna.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_sequence.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_grammared_sequence.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/sequence/_rna.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/sequence copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/test.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests/test_util.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests/test_driver.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/tests/test_block.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/_util.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/_phylogenetic.cpython-311.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/_ace.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/_lladser.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/test_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/test_lladser.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/test_gini.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests/data creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/test_ace.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/test_pd.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/tests/test_chao1.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/_chao1.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/_gini.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/alpha/_pd.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/alpha creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/test_unifrac.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta/tests/data/qiime-191-tt copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/_unifrac.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/beta/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity/beta copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/_driver.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/diversity/_block.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/diversity creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/_warning.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/test_util.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/test_iosources.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/test_registry.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/big5_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/example_file.gz -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/example_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/big5_file.bz2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/example_file.bz2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/big5_file.gz -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/real_file_2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/tests/data/real_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/_fileobject.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/fastq.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/lsmat.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_fastq.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_gff3.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_phylip.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_stockholm.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_ordination.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_binary_dm.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_lsmat.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_blast6.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_qseq.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_taxdump.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_clustal.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_embl.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_genbank.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_sample_metadata.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_embed.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/tiny_embedding_file.npz -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embed2.txt.npy -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/gff3_dna -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_default_multi_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_custom_single_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_missing_footer -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/taxdump_names.dmp -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_missing_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sample-metadata-comments.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_invalid_filter -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_custom_multi_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_single_record_lower -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/whitespace_only -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_invalid_gibberish -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_gc -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_gr -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_feature_level_record -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_dna_3_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error8 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error9 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error4 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error5 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error6 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error7 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error3 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_multiple_msa -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/legacy9_single_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/legacy9_and_blast7_default -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_multiple_references -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_single_record -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_no_qual.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_qual_tab.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_two_chunks -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_invalid_x -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_invalid_y -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_single_reference -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/legacy9_mixed_nans -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_single_record_upper -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/legacy9_multi_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_qual_vtab.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_no_data -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_spaces.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_missing_locus_name -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_invalid_data_type -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/tsv_10_fields -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error24 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error23 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error22 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error21 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error20 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_double_qual.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/taxdump_nodes.dmp -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_single_seq_sanger -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error12 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error13 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error10 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error11 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error16 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error17 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error14 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error15 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error18 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_error19 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_constructed -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_invalid_tile -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_max_width_1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_max_width_5 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_qual_space.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_malformed_data_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_diff_ids.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embed1.txt.npy -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_legacy_format -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_invalid_column_types -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_multi_seq_spaces -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_variable_length_ids -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_extensive_mixed -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/prot.emb -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_multi_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_10_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_blank_lines_between_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_qual_del.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_double_seq.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/pdb_hits.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_invalid_read -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_short_qual.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/gff3_single_record -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_custom_single_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_multi_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_uniprot_record -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_blank_lines -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_no_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_example2_scores -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_single_record_lower -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_default_multi_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_single_record_upper -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_minimal -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/gff3_bad_missing_directive -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_blanks_end_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_example3_scores -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_multi_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/tsv_8_fields -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sample-metadata-empty-rows.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_multiple_trees -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_single_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_missing_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_custom_multi_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_single_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/gff3_multi_record -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qseq_invalid_lane -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_custom_minimal -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_nonstring_labels -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_metadata_only -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_2_seqs_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_ws_lines_between_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_max_width_5 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_max_width_1 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_tabs.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_data_only -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/prot_vec.emb -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_invalid_no_data -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast7_default_single_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_blank_lines -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_multi_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_single_seq_short -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_different_padding -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_rna -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_runon_references -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/phylip_single_seq_long -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_single_record -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_long_qual.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_custom_minimal -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_all_data_types -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_qual_null.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_qual_escape.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_extensive -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/embl_single_record_simple -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/empty -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/blast6_default_single_line -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_missing_reference_items -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_biom.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_fasta.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_newick.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_blast7.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/tests/test_emptyfile.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/qseq.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/taxdump.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/phylip.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/biom.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/_blast.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/blast7.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/binary_dm.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/embed.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/gff3.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/emptyfile.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/ordination.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/_sequence_feature_vocabulary.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/genbank.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/sample_metadata.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/clustal.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/fasta.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/embl.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/stockholm.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/newick.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/format/blast6.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io/format copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/registry.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/util.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/_exception.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/io/_iosources.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/io creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_upgma.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_utils.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_majority_rule.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_nj.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests/test_compare.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests/test_upgma.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests/test_me.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests/test_tree.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests/test_majority_rule.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/tests/test_nj.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_me.cpython-311.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_tree.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_exception.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_c_nj.cpython-311.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_me.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/tree/_compare.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/tree creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests/test_embedding.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests/data/embed1.txt.npy -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding/tests/data copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/tests/test_protein.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/_protein.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/embedding/_embedding.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/embedding creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_interval.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_intersection.cpython-311.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_repr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_enan.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_io.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_mixin.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_missing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_interval.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_enan.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/override-insdc.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/non-standard-characters.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/single-column.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/simple.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/simple-with-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/empty-types-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/numeric-column.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/simple.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/complete-types-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/windows-line-endings.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/jagged.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/trailing-columns.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/BOM-simple.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/missing-data.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/mac-line-endings.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/recommended-ids.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/qiime1.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/no-columns.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/partial-types-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/unix-line-endings.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/minimal.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/all-cells-padded.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/empty-rows.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/missing-insdc.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/single-id.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/comments.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/column-order.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/valid creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/invalid-header.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/directive-before-header.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/header-only.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/empty-file -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/empty-column-name.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/non-utf-8.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/data/invalid/empty-id.tsv -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests/data/invalid copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_metadata_column.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_metadata.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/tests/test_intersection.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_testing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/io.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_metadata.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/_mixin.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/metadata/missing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/metadata creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/table creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/table/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/table/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table/tests/test_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/table/tests copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/table copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/skbio/table/_base.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/skbio/table running install_egg_info running egg_info writing scikit_bio.egg-info/PKG-INFO writing dependency_links to scikit_bio.egg-info/dependency_links.txt writing requirements to scikit_bio.egg-info/requires.txt writing top-level names to scikit_bio.egg-info/top_level.txt reading manifest file 'scikit_bio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'doc/build' no previously-included directories found matching 'doc/source/generated' no previously-included directories found matching 'web/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution warning: no previously-included files matching '.coverage' found anywhere in distribution adding license file 'LICENSE.txt' writing manifest file 'scikit_bio.egg-info/SOURCES.txt' Copying scikit_bio.egg-info to build/bdist.freebsd-14.2-RELEASE-amd64/wheel/scikit_bio-0.6.3-py3.11.egg-info running install_scripts creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/scikit_bio-0.6.3.dist-info/WHEEL creating '/wrkdirs/usr/ports/biology/py-scikit-bio/work-py311/scikit-bio-0.6.3/dist/tmpuv16hs_6/scikit_bio-0.6.3-cp311-cp311-freebsd_14_2_release_amd64.whl' and adding 'build/bdist.freebsd-14.2-RELEASE-amd64/wheel' to it adding 'skbio/__init__.py' adding 'skbio/_base.py' adding 'skbio/test.py' adding 'skbio/workflow.py' adding 'skbio/alignment/__init__.py' adding 'skbio/alignment/_indexing.py' adding 'skbio/alignment/_pairwise.py' adding 'skbio/alignment/_path.py' adding 'skbio/alignment/_repr.py' adding 'skbio/alignment/_ssw_wrapper.cpython-311.so' adding 'skbio/alignment/_tabular_msa.py' adding 'skbio/alignment/_lib/__init__.py' adding 'skbio/alignment/tests/__init__.py' adding 'skbio/alignment/tests/test_pairwise.py' adding 'skbio/alignment/tests/test_path.py' adding 'skbio/alignment/tests/test_ssw.py' adding 'skbio/alignment/tests/test_tabular_msa.py' adding 'skbio/diversity/__init__.py' adding 'skbio/diversity/_block.py' adding 'skbio/diversity/_driver.py' adding 'skbio/diversity/_phylogenetic.cpython-311.so' adding 'skbio/diversity/_util.py' adding 'skbio/diversity/alpha/__init__.py' adding 'skbio/diversity/alpha/_ace.py' adding 'skbio/diversity/alpha/_base.py' adding 'skbio/diversity/alpha/_chao1.py' adding 'skbio/diversity/alpha/_gini.py' adding 'skbio/diversity/alpha/_lladser.py' adding 'skbio/diversity/alpha/_pd.py' adding 'skbio/diversity/alpha/tests/__init__.py' adding 'skbio/diversity/alpha/tests/test_ace.py' adding 'skbio/diversity/alpha/tests/test_base.py' adding 'skbio/diversity/alpha/tests/test_chao1.py' adding 'skbio/diversity/alpha/tests/test_gini.py' adding 'skbio/diversity/alpha/tests/test_lladser.py' adding 'skbio/diversity/alpha/tests/test_pd.py' adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/README.md' adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt' adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv' adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk' adding 'skbio/diversity/beta/__init__.py' adding 'skbio/diversity/beta/_unifrac.py' adding 'skbio/diversity/beta/tests/__init__.py' adding 'skbio/diversity/beta/tests/test_unifrac.py' adding 'skbio/diversity/beta/tests/data/qiime-191-tt/README.md' adding 'skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv' adding 'skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk' adding 'skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt' adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt' adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt' adding 'skbio/diversity/tests/__init__.py' adding 'skbio/diversity/tests/test_block.py' adding 'skbio/diversity/tests/test_driver.py' adding 'skbio/diversity/tests/test_util.py' adding 'skbio/embedding/__init__.py' adding 'skbio/embedding/_embedding.py' adding 'skbio/embedding/_protein.py' adding 'skbio/embedding/tests/__init__.py' adding 'skbio/embedding/tests/test_embedding.py' adding 'skbio/embedding/tests/test_protein.py' adding 'skbio/embedding/tests/data/embed1.txt.npy' adding 'skbio/io/__init__.py' adding 'skbio/io/_exception.py' adding 'skbio/io/_fileobject.py' adding 'skbio/io/_iosources.py' adding 'skbio/io/_warning.py' adding 'skbio/io/registry.py' adding 'skbio/io/util.py' adding 'skbio/io/format/__init__.py' adding 'skbio/io/format/_base.py' adding 'skbio/io/format/_blast.py' adding 'skbio/io/format/_sequence_feature_vocabulary.py' adding 'skbio/io/format/binary_dm.py' adding 'skbio/io/format/biom.py' adding 'skbio/io/format/blast6.py' adding 'skbio/io/format/blast7.py' adding 'skbio/io/format/clustal.py' adding 'skbio/io/format/embed.py' adding 'skbio/io/format/embl.py' adding 'skbio/io/format/emptyfile.py' adding 'skbio/io/format/fasta.py' adding 'skbio/io/format/fastq.py' adding 'skbio/io/format/genbank.py' adding 'skbio/io/format/gff3.py' adding 'skbio/io/format/lsmat.py' adding 'skbio/io/format/newick.py' adding 'skbio/io/format/ordination.py' adding 'skbio/io/format/phylip.py' adding 'skbio/io/format/qseq.py' adding 'skbio/io/format/sample_metadata.py' adding 'skbio/io/format/stockholm.py' adding 'skbio/io/format/taxdump.py' adding 'skbio/io/format/tests/__init__.py' adding 'skbio/io/format/tests/test_base.py' adding 'skbio/io/format/tests/test_binary_dm.py' adding 'skbio/io/format/tests/test_biom.py' adding 'skbio/io/format/tests/test_blast6.py' adding 'skbio/io/format/tests/test_blast7.py' adding 'skbio/io/format/tests/test_clustal.py' adding 'skbio/io/format/tests/test_embed.py' adding 'skbio/io/format/tests/test_embl.py' adding 'skbio/io/format/tests/test_emptyfile.py' adding 'skbio/io/format/tests/test_fasta.py' adding 'skbio/io/format/tests/test_fastq.py' adding 'skbio/io/format/tests/test_genbank.py' adding 'skbio/io/format/tests/test_gff3.py' adding 'skbio/io/format/tests/test_lsmat.py' adding 'skbio/io/format/tests/test_newick.py' adding 'skbio/io/format/tests/test_ordination.py' adding 'skbio/io/format/tests/test_phylip.py' adding 'skbio/io/format/tests/test_qseq.py' adding 'skbio/io/format/tests/test_sample_metadata.py' adding 'skbio/io/format/tests/test_sequence_feature_vocabulary.py' adding 'skbio/io/format/tests/test_stockholm.py' adding 'skbio/io/format/tests/test_taxdump.py' adding 'skbio/io/format/tests/data/blast6_custom_minimal' adding 'skbio/io/format/tests/data/blast6_custom_mixed_nans' adding 'skbio/io/format/tests/data/blast6_custom_multi_line' adding 'skbio/io/format/tests/data/blast6_custom_single_line' adding 'skbio/io/format/tests/data/blast6_default_multi_line' adding 'skbio/io/format/tests/data/blast6_default_single_line' adding 'skbio/io/format/tests/data/blast6_invalid_column_types' adding 'skbio/io/format/tests/data/blast6_invalid_number_of_columns' adding 'skbio/io/format/tests/data/blast6_invalid_type_in_column' adding 'skbio/io/format/tests/data/blast7_custom_minimal' adding 'skbio/io/format/tests/data/blast7_custom_mixed_nans' adding 'skbio/io/format/tests/data/blast7_custom_multi_line' adding 'skbio/io/format/tests/data/blast7_custom_single_line' adding 'skbio/io/format/tests/data/blast7_default_multi_line' adding 'skbio/io/format/tests/data/blast7_default_single_line' adding 'skbio/io/format/tests/data/blast7_invalid_differing_fields' adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer' adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer_2' adding 'skbio/io/format/tests/data/blast7_invalid_gibberish' adding 'skbio/io/format/tests/data/blast7_invalid_no_data' adding 'skbio/io/format/tests/data/blast7_invalid_too_many_columns' adding 'skbio/io/format/tests/data/blast7_invalid_unrecognized_field' adding 'skbio/io/format/tests/data/embed1.txt.npy' adding 'skbio/io/format/tests/data/embed2.txt.npy' adding 'skbio/io/format/tests/data/embl_constructed' adding 'skbio/io/format/tests/data/embl_feature_level_record' adding 'skbio/io/format/tests/data/embl_feature_level_record_no_FT' adding 'skbio/io/format/tests/data/embl_multi_records' adding 'skbio/io/format/tests/data/embl_single_record' adding 'skbio/io/format/tests/data/embl_single_record_lower' adding 'skbio/io/format/tests/data/embl_single_record_simple' adding 'skbio/io/format/tests/data/embl_single_record_upper' adding 'skbio/io/format/tests/data/embl_uniprot_record' adding 'skbio/io/format/tests/data/embl_w_beginning_whitespace' adding 'skbio/io/format/tests/data/empty' adding 'skbio/io/format/tests/data/error_diff_ids.fastq' adding 'skbio/io/format/tests/data/error_double_qual.fastq' adding 'skbio/io/format/tests/data/error_double_seq.fastq' adding 'skbio/io/format/tests/data/error_long_qual.fastq' adding 'skbio/io/format/tests/data/error_no_qual.fastq' adding 'skbio/io/format/tests/data/error_qual_del.fastq' adding 'skbio/io/format/tests/data/error_qual_escape.fastq' adding 'skbio/io/format/tests/data/error_qual_null.fastq' adding 'skbio/io/format/tests/data/error_qual_space.fastq' adding 'skbio/io/format/tests/data/error_qual_tab.fastq' adding 'skbio/io/format/tests/data/error_qual_unit_sep.fastq' adding 'skbio/io/format/tests/data/error_qual_vtab.fastq' adding 'skbio/io/format/tests/data/error_short_qual.fastq' adding 'skbio/io/format/tests/data/error_spaces.fastq' adding 'skbio/io/format/tests/data/error_tabs.fastq' adding 'skbio/io/format/tests/data/error_trunc_at_plus.fastq' adding 'skbio/io/format/tests/data/error_trunc_at_qual.fastq' adding 'skbio/io/format/tests/data/error_trunc_at_seq.fastq' adding 'skbio/io/format/tests/data/error_trunc_in_plus.fastq' adding 'skbio/io/format/tests/data/error_trunc_in_qual.fastq' adding 'skbio/io/format/tests/data/error_trunc_in_seq.fastq' adding 'skbio/io/format/tests/data/error_trunc_in_title.fastq' adding 'skbio/io/format/tests/data/fasta_10_seqs' adding 'skbio/io/format/tests/data/fasta_3_seqs_defaults' adding 'skbio/io/format/tests/data/fasta_3_seqs_non_defaults' adding 'skbio/io/format/tests/data/fasta_5_blanks_start_of_file' adding 'skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file' adding 'skbio/io/format/tests/data/fasta_6_blanks_start_of_file' adding 'skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file' adding 'skbio/io/format/tests/data/fasta_blank_lines_between_records' adding 'skbio/io/format/tests/data/fasta_blanks_end_of_file' adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str' adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char' adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_none' adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str' adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char' adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_none' adding 'skbio/io/format/tests/data/fasta_invalid_after_10_seqs' adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_after_header' adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence' adding 'skbio/io/format/tests/data/fasta_invalid_blank_sequence' adding 'skbio/io/format/tests/data/fasta_invalid_legacy_format' adding 'skbio/io/format/tests/data/fasta_invalid_missing_header' adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first' adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last' adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle' adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header' adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence' adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence' adding 'skbio/io/format/tests/data/fasta_max_width_1' adding 'skbio/io/format/tests/data/fasta_max_width_5' adding 'skbio/io/format/tests/data/fasta_mixed_qual_scores' adding 'skbio/io/format/tests/data/fasta_multi_seq' adding 'skbio/io/format/tests/data/fasta_multi_seq_roundtrip' adding 'skbio/io/format/tests/data/fasta_multi_seq_spaces' adding 'skbio/io/format/tests/data/fasta_prot_seqs_odd_labels' adding 'skbio/io/format/tests/data/fasta_single_bio_seq_defaults' adding 'skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults' adding 'skbio/io/format/tests/data/fasta_single_dna_seq_defaults' adding 'skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults' adding 'skbio/io/format/tests/data/fasta_single_prot_seq_defaults' adding 'skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults' adding 'skbio/io/format/tests/data/fasta_single_rna_seq_defaults' adding 'skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults' adding 'skbio/io/format/tests/data/fasta_single_seq' adding 'skbio/io/format/tests/data/fasta_tabular_msa_different_type' adding 'skbio/io/format/tests/data/fasta_ws_lines_between_records' adding 'skbio/io/format/tests/data/fasta_ws_lines_end_of_file' adding 'skbio/io/format/tests/data/fastq_5_blanks_start_of_file' adding 'skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file' adding 'skbio/io/format/tests/data/fastq_blank_lines' adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_header' adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_plus' adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_seq' adding 'skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol' adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_qual' adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_seq' adding 'skbio/io/format/tests/data/fastq_invalid_missing_header' adding 'skbio/io/format/tests/data/fastq_invalid_missing_seq_data' adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_header' adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus' adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq' adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual' adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq' adding 'skbio/io/format/tests/data/fastq_multi_blank_between_records' adding 'skbio/io/format/tests/data/fastq_multi_blank_end_of_file' adding 'skbio/io/format/tests/data/fastq_multi_blank_start_of_file' adding 'skbio/io/format/tests/data/fastq_multi_seq_sanger' adding 'skbio/io/format/tests/data/fastq_multi_whitespace_stripping' adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_between_records' adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file' adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file' adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.3' adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.8' adding 'skbio/io/format/tests/data/fastq_whitespace_only_lines' adding 'skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description' adding 'skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description' adding 'skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description' adding 'skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults' adding 'skbio/io/format/tests/data/fastq_writer_sanger_defaults' adding 'skbio/io/format/tests/data/fastq_writer_sanger_non_defaults' adding 'skbio/io/format/tests/data/genbank_5_blanks_start_of_file' adding 'skbio/io/format/tests/data/genbank_6_blanks_start_of_file' adding 'skbio/io/format/tests/data/genbank_missing_locus_name' adding 'skbio/io/format/tests/data/genbank_multi_records' adding 'skbio/io/format/tests/data/genbank_single_record' adding 'skbio/io/format/tests/data/genbank_single_record_lower' adding 'skbio/io/format/tests/data/genbank_single_record_upper' adding 'skbio/io/format/tests/data/genbank_w_beginning_whitespace' adding 'skbio/io/format/tests/data/gff3_bad_missing_directive' adding 'skbio/io/format/tests/data/gff3_bad_wrong_columns' adding 'skbio/io/format/tests/data/gff3_dna' adding 'skbio/io/format/tests/data/gff3_multi_record' adding 'skbio/io/format/tests/data/gff3_single_record' adding 'skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq' adding 'skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq' adding 'skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq' adding 'skbio/io/format/tests/data/legacy9_and_blast7_default' adding 'skbio/io/format/tests/data/legacy9_invalid_differing_fields' adding 'skbio/io/format/tests/data/legacy9_invalid_too_many_columns' adding 'skbio/io/format/tests/data/legacy9_mixed_nans' adding 'skbio/io/format/tests/data/legacy9_multi_line' adding 'skbio/io/format/tests/data/legacy9_single_line' adding 'skbio/io/format/tests/data/longreads_as_illumina.fastq' adding 'skbio/io/format/tests/data/longreads_as_sanger.fastq' adding 'skbio/io/format/tests/data/longreads_original_sanger.fastq' adding 'skbio/io/format/tests/data/misc_dna_as_illumina.fastq' adding 'skbio/io/format/tests/data/misc_dna_as_sanger.fastq' adding 'skbio/io/format/tests/data/misc_dna_original_sanger.fastq' adding 'skbio/io/format/tests/data/misc_rna_as_illumina.fastq' adding 'skbio/io/format/tests/data/misc_rna_as_sanger.fastq' adding 'skbio/io/format/tests/data/misc_rna_original_sanger.fastq' adding 'skbio/io/format/tests/data/ordination_L&L_CA_data_scores' adding 'skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores' adding 'skbio/io/format/tests/data/ordination_error1' adding 'skbio/io/format/tests/data/ordination_error10' adding 'skbio/io/format/tests/data/ordination_error11' adding 'skbio/io/format/tests/data/ordination_error12' adding 'skbio/io/format/tests/data/ordination_error13' adding 'skbio/io/format/tests/data/ordination_error14' adding 'skbio/io/format/tests/data/ordination_error15' adding 'skbio/io/format/tests/data/ordination_error16' adding 'skbio/io/format/tests/data/ordination_error17' adding 'skbio/io/format/tests/data/ordination_error18' adding 'skbio/io/format/tests/data/ordination_error19' adding 'skbio/io/format/tests/data/ordination_error2' adding 'skbio/io/format/tests/data/ordination_error20' adding 'skbio/io/format/tests/data/ordination_error21' adding 'skbio/io/format/tests/data/ordination_error22' adding 'skbio/io/format/tests/data/ordination_error23' adding 'skbio/io/format/tests/data/ordination_error24' adding 'skbio/io/format/tests/data/ordination_error3' adding 'skbio/io/format/tests/data/ordination_error4' adding 'skbio/io/format/tests/data/ordination_error5' adding 'skbio/io/format/tests/data/ordination_error6' adding 'skbio/io/format/tests/data/ordination_error7' adding 'skbio/io/format/tests/data/ordination_error8' adding 'skbio/io/format/tests/data/ordination_error9' adding 'skbio/io/format/tests/data/ordination_example2_scores' adding 'skbio/io/format/tests/data/ordination_example3_scores' adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site' adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints' adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species' adding 'skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site' adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site' adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints' adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species' adding 'skbio/io/format/tests/data/pdb_hits.txt' adding 'skbio/io/format/tests/data/phylip_dna_3_seqs' adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_after_header' adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_before_header' adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs' adding 'skbio/io/format/tests/data/phylip_invalid_header_too_long' adding 'skbio/io/format/tests/data/phylip_invalid_header_too_short' adding 'skbio/io/format/tests/data/phylip_invalid_no_header' adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_long' adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_short' adding 'skbio/io/format/tests/data/phylip_invalid_too_few_seqs' adding 'skbio/io/format/tests/data/phylip_invalid_too_many_seqs' adding 'skbio/io/format/tests/data/phylip_invalid_zero_seq_len' adding 'skbio/io/format/tests/data/phylip_invalid_zero_seqs' adding 'skbio/io/format/tests/data/phylip_single_seq_long' adding 'skbio/io/format/tests/data/phylip_single_seq_short' adding 'skbio/io/format/tests/data/phylip_two_chunks' adding 'skbio/io/format/tests/data/phylip_variable_length_ids' adding 'skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs' adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_1' adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_2' adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_3' adding 'skbio/io/format/tests/data/prot.emb' adding 'skbio/io/format/tests/data/prot_vec.emb' adding 'skbio/io/format/tests/data/qseq_invalid_filter' adding 'skbio/io/format/tests/data/qseq_invalid_lane' adding 'skbio/io/format/tests/data/qseq_invalid_read' adding 'skbio/io/format/tests/data/qseq_invalid_tile' adding 'skbio/io/format/tests/data/qseq_invalid_x' adding 'skbio/io/format/tests/data/qseq_invalid_y' adding 'skbio/io/format/tests/data/qseq_multi_seq_illumina1.3' adding 'skbio/io/format/tests/data/qseq_single_seq_sanger' adding 'skbio/io/format/tests/data/qual_2_seqs_defaults' adding 'skbio/io/format/tests/data/qual_3_seqs_defaults' adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch' adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_extra' adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch' adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch' adding 'skbio/io/format/tests/data/qual_3_seqs_non_defaults' adding 'skbio/io/format/tests/data/qual_5_blanks_start_of_file' adding 'skbio/io/format/tests/data/qual_5_ws_lines_start_of_file' adding 'skbio/io/format/tests/data/qual_6_blanks_start_of_file' adding 'skbio/io/format/tests/data/qual_6_ws_lines_start_of_file' adding 'skbio/io/format/tests/data/qual_blank_lines_between_records' adding 'skbio/io/format/tests/data/qual_blanks_end_of_file' adding 'skbio/io/format/tests/data/qual_description_newline_replacement_empty_str' adding 'skbio/io/format/tests/data/qual_description_newline_replacement_multi_char' adding 'skbio/io/format/tests/data/qual_description_newline_replacement_none' adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str' adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char' adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_none' adding 'skbio/io/format/tests/data/qual_invalid_blank_line_after_header' adding 'skbio/io/format/tests/data/qual_invalid_blank_line_within_seq' adding 'skbio/io/format/tests/data/qual_invalid_blank_sequence' adding 'skbio/io/format/tests/data/qual_invalid_legacy_format' adding 'skbio/io/format/tests/data/qual_invalid_missing_header' adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first' adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last' adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle' adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_float' adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_negative' adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_over_255' adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_string' adding 'skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq' adding 'skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence' adding 'skbio/io/format/tests/data/qual_invalid_ws_line_after_header' adding 'skbio/io/format/tests/data/qual_max_width_1' adding 'skbio/io/format/tests/data/qual_max_width_5' adding 'skbio/io/format/tests/data/qual_multi_seq' adding 'skbio/io/format/tests/data/qual_multi_seq_roundtrip' adding 'skbio/io/format/tests/data/qual_prot_seqs_odd_labels' adding 'skbio/io/format/tests/data/qual_single_bio_seq_non_defaults' adding 'skbio/io/format/tests/data/qual_single_dna_seq_non_defaults' adding 'skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults' adding 'skbio/io/format/tests/data/qual_single_prot_seq_non_defaults' adding 'skbio/io/format/tests/data/qual_single_rna_seq_non_defaults' adding 'skbio/io/format/tests/data/qual_single_seq' adding 'skbio/io/format/tests/data/qual_tabular_msa_different_type' adding 'skbio/io/format/tests/data/qual_ws_lines_between_records' adding 'skbio/io/format/tests/data/qual_ws_lines_end_of_file' adding 'skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv' adding 'skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv' adding 'skbio/io/format/tests/data/sample-metadata-comments.tsv' adding 'skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv' adding 'skbio/io/format/tests/data/sample-metadata-empty-rows.tsv' adding 'skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv' adding 'skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv' adding 'skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq' adding 'skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq' adding 'skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq' adding 'skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq' adding 'skbio/io/format/tests/data/stockholm_all_data_types' adding 'skbio/io/format/tests/data/stockholm_blank_lines' adding 'skbio/io/format/tests/data/stockholm_data_only' adding 'skbio/io/format/tests/data/stockholm_different_padding' adding 'skbio/io/format/tests/data/stockholm_differing_gc_data_length' adding 'skbio/io/format/tests/data/stockholm_differing_gr_data_length' adding 'skbio/io/format/tests/data/stockholm_differing_seq_lengths' adding 'skbio/io/format/tests/data/stockholm_duplicate_gc' adding 'skbio/io/format/tests/data/stockholm_duplicate_gr' adding 'skbio/io/format/tests/data/stockholm_duplicate_sequence_names' adding 'skbio/io/format/tests/data/stockholm_duplicate_tree_ids' adding 'skbio/io/format/tests/data/stockholm_extensive' adding 'skbio/io/format/tests/data/stockholm_extensive_mixed' adding 'skbio/io/format/tests/data/stockholm_invalid_data_type' adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr' adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs' adding 'skbio/io/format/tests/data/stockholm_malformed_data_line' adding 'skbio/io/format/tests/data/stockholm_malformed_gc_line' adding 'skbio/io/format/tests/data/stockholm_malformed_gf_line' adding 'skbio/io/format/tests/data/stockholm_malformed_gr_line' adding 'skbio/io/format/tests/data/stockholm_malformed_gs_line' adding 'skbio/io/format/tests/data/stockholm_metadata_only' adding 'skbio/io/format/tests/data/stockholm_minimal' adding 'skbio/io/format/tests/data/stockholm_missing_footer' adding 'skbio/io/format/tests/data/stockholm_missing_header' adding 'skbio/io/format/tests/data/stockholm_missing_reference_items' adding 'skbio/io/format/tests/data/stockholm_missing_rn_tag' adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_no_id' adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_with_id' adding 'skbio/io/format/tests/data/stockholm_multiple_msa' adding 'skbio/io/format/tests/data/stockholm_multiple_multi_line_trees' adding 'skbio/io/format/tests/data/stockholm_multiple_references' adding 'skbio/io/format/tests/data/stockholm_multiple_trees' adding 'skbio/io/format/tests/data/stockholm_no_data' adding 'skbio/io/format/tests/data/stockholm_nonstring_labels' adding 'skbio/io/format/tests/data/stockholm_rna' adding 'skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace' adding 'skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace' adding 'skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace' adding 'skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace' adding 'skbio/io/format/tests/data/stockholm_runon_references' adding 'skbio/io/format/tests/data/stockholm_runon_references_mixed' adding 'skbio/io/format/tests/data/stockholm_single_reference' adding 'skbio/io/format/tests/data/stockholm_single_tree_with_id' adding 'skbio/io/format/tests/data/stockholm_single_tree_without_id' adding 'skbio/io/format/tests/data/stockholm_two_of_each_metadata' adding 'skbio/io/format/tests/data/stockholm_whitespace_only_lines' adding 'skbio/io/format/tests/data/taxdump_names.dmp' adding 'skbio/io/format/tests/data/taxdump_nodes.dmp' adding 'skbio/io/format/tests/data/tiny_embedding_file.npz' adding 'skbio/io/format/tests/data/tsv_10_fields' adding 'skbio/io/format/tests/data/tsv_8_fields' adding 'skbio/io/format/tests/data/whitespace_only' adding 'skbio/io/format/tests/data/wrapping_as_illumina.fastq' adding 'skbio/io/format/tests/data/wrapping_as_sanger.fastq' adding 'skbio/io/format/tests/data/wrapping_original_sanger.fastq' adding 'skbio/io/tests/__init__.py' adding 'skbio/io/tests/test_iosources.py' adding 'skbio/io/tests/test_registry.py' adding 'skbio/io/tests/test_util.py' adding 'skbio/io/tests/data/big5_file' adding 'skbio/io/tests/data/big5_file.bz2' adding 'skbio/io/tests/data/big5_file.gz' adding 'skbio/io/tests/data/example_file' adding 'skbio/io/tests/data/example_file.bz2' adding 'skbio/io/tests/data/example_file.gz' adding 'skbio/io/tests/data/real_file' adding 'skbio/io/tests/data/real_file_2' adding 'skbio/metadata/__init__.py' adding 'skbio/metadata/_enan.py' adding 'skbio/metadata/_intersection.cpython-311.so' adding 'skbio/metadata/_interval.py' adding 'skbio/metadata/_metadata.py' adding 'skbio/metadata/_mixin.py' adding 'skbio/metadata/_repr.py' adding 'skbio/metadata/_testing.py' adding 'skbio/metadata/base.py' adding 'skbio/metadata/io.py' adding 'skbio/metadata/missing.py' adding 'skbio/metadata/tests/__init__.py' adding 'skbio/metadata/tests/test_enan.py' adding 'skbio/metadata/tests/test_intersection.py' adding 'skbio/metadata/tests/test_interval.py' adding 'skbio/metadata/tests/test_io.py' adding 'skbio/metadata/tests/test_metadata.py' adding 'skbio/metadata/tests/test_metadata_column.py' adding 'skbio/metadata/tests/test_missing.py' adding 'skbio/metadata/tests/test_mixin.py' adding 'skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv' adding 'skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv' adding 'skbio/metadata/tests/data/invalid/data-longer-than-header.tsv' adding 'skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv' adding 'skbio/metadata/tests/data/invalid/directive-before-header.tsv' adding 'skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv' adding 'skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv' adding 'skbio/metadata/tests/data/invalid/duplicate-column-names.tsv' adding 'skbio/metadata/tests/data/invalid/duplicate-directives.tsv' adding 'skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv' adding 'skbio/metadata/tests/data/invalid/duplicate-ids.tsv' adding 'skbio/metadata/tests/data/invalid/empty-column-name.tsv' adding 'skbio/metadata/tests/data/invalid/empty-file' adding 'skbio/metadata/tests/data/invalid/empty-id.tsv' adding 'skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv' adding 'skbio/metadata/tests/data/invalid/header-only.tsv' adding 'skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv' adding 'skbio/metadata/tests/data/invalid/invalid-header.tsv' adding 'skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv' adding 'skbio/metadata/tests/data/invalid/non-utf-8.tsv' adding 'skbio/metadata/tests/data/invalid/qiime1-empty.tsv' adding 'skbio/metadata/tests/data/invalid/simple-utf-16be.txt' adding 'skbio/metadata/tests/data/invalid/simple-utf-16le.txt' adding 'skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv' adding 'skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv' adding 'skbio/metadata/tests/data/invalid/unrecognized-directive.tsv' adding 'skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv' adding 'skbio/metadata/tests/data/invalid/whitespace-only-id.tsv' adding 'skbio/metadata/tests/data/valid/BOM-simple.txt' adding 'skbio/metadata/tests/data/valid/all-cells-padded.tsv' adding 'skbio/metadata/tests/data/valid/biom-observation-metadata.tsv' adding 'skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv' adding 'skbio/metadata/tests/data/valid/column-order.tsv' adding 'skbio/metadata/tests/data/valid/comments.tsv' adding 'skbio/metadata/tests/data/valid/complete-types-directive.tsv' adding 'skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv' adding 'skbio/metadata/tests/data/valid/empty-rows.tsv' adding 'skbio/metadata/tests/data/valid/empty-types-directive.tsv' adding 'skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv' adding 'skbio/metadata/tests/data/valid/jagged.tsv' adding 'skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv' adding 'skbio/metadata/tests/data/valid/mac-line-endings.tsv' adding 'skbio/metadata/tests/data/valid/minimal.tsv' adding 'skbio/metadata/tests/data/valid/missing-data.tsv' adding 'skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv' adding 'skbio/metadata/tests/data/valid/missing-insdc.tsv' adding 'skbio/metadata/tests/data/valid/no-columns.tsv' adding 'skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv' adding 'skbio/metadata/tests/data/valid/no-newline-at-eof.tsv' adding 'skbio/metadata/tests/data/valid/non-standard-characters.tsv' adding 'skbio/metadata/tests/data/valid/numeric-column.tsv' adding 'skbio/metadata/tests/data/valid/override-insdc.tsv' adding 'skbio/metadata/tests/data/valid/partial-types-directive.tsv' adding 'skbio/metadata/tests/data/valid/qiime1.tsv' adding 'skbio/metadata/tests/data/valid/qiita-preparation-information.tsv' adding 'skbio/metadata/tests/data/valid/qiita-sample-information.tsv' adding 'skbio/metadata/tests/data/valid/recommended-ids.tsv' adding 'skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv' adding 'skbio/metadata/tests/data/valid/simple-with-directive.tsv' adding 'skbio/metadata/tests/data/valid/simple.tsv' adding 'skbio/metadata/tests/data/valid/simple.txt' adding 'skbio/metadata/tests/data/valid/single-column.tsv' adding 'skbio/metadata/tests/data/valid/single-id.tsv' adding 'skbio/metadata/tests/data/valid/trailing-columns.tsv' adding 'skbio/metadata/tests/data/valid/unix-line-endings.tsv' adding 'skbio/metadata/tests/data/valid/windows-line-endings.tsv' adding 'skbio/sequence/__init__.py' adding 'skbio/sequence/_alphabet.py' adding 'skbio/sequence/_dna.py' adding 'skbio/sequence/_genetic_code.py' adding 'skbio/sequence/_grammared_sequence.py' adding 'skbio/sequence/_nucleotide_mixin.py' adding 'skbio/sequence/_protein.py' adding 'skbio/sequence/_repr.py' adding 'skbio/sequence/_rna.py' adding 'skbio/sequence/_sequence.py' adding 'skbio/sequence/_substitution.py' adding 'skbio/sequence/distance.py' adding 'skbio/sequence/tests/__init__.py' adding 'skbio/sequence/tests/test_alphabet.py' adding 'skbio/sequence/tests/test_distance.py' adding 'skbio/sequence/tests/test_dna.py' adding 'skbio/sequence/tests/test_genetic_code.py' adding 'skbio/sequence/tests/test_grammared_sequence.py' adding 'skbio/sequence/tests/test_nucleotide_sequences.py' adding 'skbio/sequence/tests/test_protein.py' adding 'skbio/sequence/tests/test_rna.py' adding 'skbio/sequence/tests/test_sequence.py' adding 'skbio/sequence/tests/test_substitution.py' adding 'skbio/stats/__init__.py' adding 'skbio/stats/_misc.py' adding 'skbio/stats/_subsample.py' adding 'skbio/stats/composition.py' adding 'skbio/stats/gradient.py' adding 'skbio/stats/power.py' adding 'skbio/stats/distance/__init__.py' adding 'skbio/stats/distance/_anosim.py' adding 'skbio/stats/distance/_base.py' adding 'skbio/stats/distance/_bioenv.py' adding 'skbio/stats/distance/_cutils.cpython-311.so' adding 'skbio/stats/distance/_mantel.py' adding 'skbio/stats/distance/_permanova.py' adding 'skbio/stats/distance/_permdisp.py' adding 'skbio/stats/distance/_utils.py' adding 'skbio/stats/distance/tests/__init__.py' adding 'skbio/stats/distance/tests/test_anosim.py' adding 'skbio/stats/distance/tests/test_base.py' adding 'skbio/stats/distance/tests/test_bioenv.py' adding 'skbio/stats/distance/tests/test_mantel.py' adding 'skbio/stats/distance/tests/test_permanova.py' adding 'skbio/stats/distance/tests/test_permdisp.py' adding 'skbio/stats/distance/tests/data/bioenv_df_vegan.txt' adding 'skbio/stats/distance/tests/data/bioenv_dm_vegan.txt' adding 'skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt' adding 'skbio/stats/distance/tests/data/df.txt' adding 'skbio/stats/distance/tests/data/df_extra_column.txt' adding 'skbio/stats/distance/tests/data/dm.txt' adding 'skbio/stats/distance/tests/data/dm2.txt' adding 'skbio/stats/distance/tests/data/dm3.txt' adding 'skbio/stats/distance/tests/data/dm4.txt' adding 'skbio/stats/distance/tests/data/dm_reordered.txt' adding 'skbio/stats/distance/tests/data/exp_results.txt' adding 'skbio/stats/distance/tests/data/exp_results_different_column_order.txt' adding 'skbio/stats/distance/tests/data/exp_results_single_column.txt' adding 'skbio/stats/distance/tests/data/frameSeries_dm.tsv' adding 'skbio/stats/distance/tests/data/frameSeries_grouping.tsv' adding 'skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt' adding 'skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt' adding 'skbio/stats/distance/tests/data/moving_pictures_dm.tsv' adding 'skbio/stats/distance/tests/data/moving_pictures_mf.tsv' adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt' adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt' adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt' adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt' adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt' adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt' adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt' adding 'skbio/stats/evolve/__init__.py' adding 'skbio/stats/evolve/_hommola.py' adding 'skbio/stats/evolve/tests/__init__.py' adding 'skbio/stats/evolve/tests/test_hommola.py' adding 'skbio/stats/ordination/__init__.py' adding 'skbio/stats/ordination/_canonical_correspondence_analysis.py' adding 'skbio/stats/ordination/_correspondence_analysis.py' adding 'skbio/stats/ordination/_cutils.cpython-311.so' adding 'skbio/stats/ordination/_ordination_results.py' adding 'skbio/stats/ordination/_principal_coordinate_analysis.py' adding 'skbio/stats/ordination/_redundancy_analysis.py' adding 'skbio/stats/ordination/_utils.py' adding 'skbio/stats/ordination/tests/__init__.py' adding 'skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py' adding 'skbio/stats/ordination/tests/test_correspondence_analysis.py' adding 'skbio/stats/ordination/tests/test_ordination_results.py' adding 'skbio/stats/ordination/tests/test_principal_coordinate_analysis.py' adding 'skbio/stats/ordination/tests/test_redundancy_analysis.py' adding 'skbio/stats/ordination/tests/test_util.py' adding 'skbio/stats/ordination/tests/data/L&L_CA_data' adding 'skbio/stats/ordination/tests/data/PCoA_biplot_descriptors' adding 'skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors' adding 'skbio/stats/ordination/tests/data/PCoA_sample_data' adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_12dim' adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_2' adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3' adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim' adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim' adding 'skbio/stats/ordination/tests/data/PCoA_skbio' adding 'skbio/stats/ordination/tests/data/example2_X' adding 'skbio/stats/ordination/tests/data/example2_Y' adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling1' adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling2' adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1' adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2' adding 'skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan' adding 'skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan' adding 'skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan' adding 'skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan' adding 'skbio/stats/ordination/tests/data/example3_X' adding 'skbio/stats/ordination/tests/data/example3_Y' adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling1' adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling2' adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1' adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2' adding 'skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan' adding 'skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan' adding 'skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan' adding 'skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan' adding 'skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site' adding 'skbio/stats/ordination/tests/data/exp_PCoAzeros_site' adding 'skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv' adding 'skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv' adding 'skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv' adding 'skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv' adding 'skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv' adding 'skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv' adding 'skbio/stats/ordination/tests/data/varechem.csv' adding 'skbio/stats/ordination/tests/data/varespec.csv' adding 'skbio/stats/tests/__init__.py' adding 'skbio/stats/tests/test_composition.py' adding 'skbio/stats/tests/test_gradient.py' adding 'skbio/stats/tests/test_misc.py' adding 'skbio/stats/tests/test_power.py' adding 'skbio/stats/tests/test_subsample.py' adding 'skbio/stats/tests/data/cr_data_out' adding 'skbio/stats/tests/data/cr_data_raw' adding 'skbio/stats/tests/data/cr_no_data_out' adding 'skbio/stats/tests/data/cr_no_data_raw' adding 'skbio/stats/tests/data/gr_w_msg_out' adding 'skbio/stats/tests/data/gr_w_msg_raw' adding 'skbio/stats/tests/data/gr_wo_msg_out' adding 'skbio/stats/tests/data/gr_wo_msg_raw' adding 'skbio/stats/tests/data/vr_out' adding 'skbio/stats/tests/data/vr_raw' adding 'skbio/stats/tests/data/vr_real_out' adding 'skbio/stats/tests/data/vr_real_raw' adding 'skbio/table/__init__.py' adding 'skbio/table/_base.py' adding 'skbio/table/tests/__init__.py' adding 'skbio/table/tests/test_base.py' adding 'skbio/tests/__init__.py' adding 'skbio/tests/test_base.py' adding 'skbio/tests/test_workflow.py' adding 'skbio/tree/__init__.py' adding 'skbio/tree/_c_me.cpython-311.so' adding 'skbio/tree/_c_nj.cpython-311.so' adding 'skbio/tree/_compare.py' adding 'skbio/tree/_exception.py' adding 'skbio/tree/_majority_rule.py' adding 'skbio/tree/_me.py' adding 'skbio/tree/_nj.py' adding 'skbio/tree/_tree.py' adding 'skbio/tree/_upgma.py' adding 'skbio/tree/_utils.py' adding 'skbio/tree/tests/__init__.py' adding 'skbio/tree/tests/test_compare.py' adding 'skbio/tree/tests/test_majority_rule.py' adding 'skbio/tree/tests/test_me.py' adding 'skbio/tree/tests/test_nj.py' adding 'skbio/tree/tests/test_tree.py' adding 'skbio/tree/tests/test_upgma.py' adding 'skbio/util/__init__.py' adding 'skbio/util/_decorator.py' adding 'skbio/util/_docstring.py' adding 'skbio/util/_exception.py' adding 'skbio/util/_misc.py' adding 'skbio/util/_plotting.py' adding 'skbio/util/_testing.py' adding 'skbio/util/_warning.py' adding 'skbio/util/tests/__init__.py' adding 'skbio/util/tests/test_decorator.py' adding 'skbio/util/tests/test_docstring.py' adding 'skbio/util/tests/test_misc.py' adding 'skbio/util/tests/test_plotting.py' adding 'skbio/util/tests/test_testing.py' adding 'skbio/util/tests/test_warning.py' adding 'scikit_bio-0.6.3.dist-info/LICENSE.txt' adding 'scikit_bio-0.6.3.dist-info/METADATA' adding 'scikit_bio-0.6.3.dist-info/WHEEL' adding 'scikit_bio-0.6.3.dist-info/top_level.txt' adding 'scikit_bio-0.6.3.dist-info/RECORD' removing build/bdist.freebsd-14.2-RELEASE-amd64/wheel Successfully built scikit_bio-0.6.3-cp311-cp311-freebsd_14_2_release_amd64.whl =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-scikit-bio-0.6.3 depends on package: py311-biom-format>0 - not found ===> Installing existing package /packages/All/py311-biom-format-2.1.16_1.pkg [pkg-builder.dan.net.uk] Installing py311-biom-format-2.1.16_1... 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[pkg-builder.dan.net.uk] | `-- Extracting py311-tzdata-2025.2: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-pandas-2.2.3,1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-scipy-1.11.1_4,1... [pkg-builder.dan.net.uk] | `-- Installing blas-3.12.1... [pkg-builder.dan.net.uk] | `-- Extracting blas-3.12.1: ..... done [pkg-builder.dan.net.uk] `-- Extracting py311-scipy-1.11.1_4,1: .......... done [pkg-builder.dan.net.uk] Extracting py311-biom-format-2.1.16_1: .......... done ===== Message from py311-pandas-2.2.3,1: -- Install math/py-statsmodels to enable parts of pandas.stats. Install devel/py-xarray to enable the to_xarray() function. ===> py311-scikit-bio-0.6.3 depends on package: py311-biom-format>0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-decorator>=3.4.2 - not found ===> Installing existing package /packages/All/py311-decorator-5.2.1.pkg [pkg-builder.dan.net.uk] Installing py311-decorator-5.2.1... [pkg-builder.dan.net.uk] Extracting py311-decorator-5.2.1: ......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-decorator>=3.4.2 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-h5py>=3.6.0 - found ===> py311-scikit-bio-0.6.3 depends on package: py311-hdmedians>=0.14.1 - not found ===> Installing existing package /packages/All/py311-hdmedians-0.14.2_2.pkg [pkg-builder.dan.net.uk] Installing py311-hdmedians-0.14.2_2... [pkg-builder.dan.net.uk] Extracting py311-hdmedians-0.14.2_2: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-hdmedians>=0.14.1 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-ipython>=3.2.0 - not found ===> Installing existing package /packages/All/py311-ipython-8.18.1_1.pkg [pkg-builder.dan.net.uk] Installing py311-ipython-8.18.1_1... [pkg-builder.dan.net.uk] `-- Installing py311-jedi-0.19.1_1... [pkg-builder.dan.net.uk] | `-- Installing py311-parso-0.8.4_1... [pkg-builder.dan.net.uk] | `-- Extracting py311-parso-0.8.4_1: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-jedi-0.19.1_1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-matplotlib-inline-0.1.6_1... [pkg-builder.dan.net.uk] | `-- Installing py311-traitlets-5.14.3... 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[pkg-builder.dan.net.uk] | `-- Installing py311-asttokens-2.4.1_1... [pkg-builder.dan.net.uk] | `-- Extracting py311-asttokens-2.4.1_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-executing-2.2.0... [pkg-builder.dan.net.uk] | `-- Extracting py311-executing-2.2.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-pure-eval-0.2.3... [pkg-builder.dan.net.uk] | `-- Extracting py311-pure-eval-0.2.3: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-stack-data-0.6.3_1: .......... done [pkg-builder.dan.net.uk] Extracting py311-ipython-8.18.1_1: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-ipython>=3.2.0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-matplotlib>=1.4.3 - not found ===> Installing existing package /packages/All/py311-matplotlib-3.8.0_1.pkg [pkg-builder.dan.net.uk] Installing py311-matplotlib-3.8.0_1... [pkg-builder.dan.net.uk] `-- Installing fontconfig-2.15.0_3,1... [pkg-builder.dan.net.uk] | `-- Installing expat-2.7.1... [pkg-builder.dan.net.uk] | `-- Extracting expat-2.7.1: .......... done [pkg-builder.dan.net.uk] | `-- Installing freetype2-2.13.3... [pkg-builder.dan.net.uk] | `-- Extracting freetype2-2.13.3: .......... done [pkg-builder.dan.net.uk] `-- Extracting fontconfig-2.15.0_3,1: .......... done [pkg-builder.dan.net.uk] `-- Installing png-1.6.47... [pkg-builder.dan.net.uk] `-- Extracting png-1.6.47: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-certifi-2025.1.31... [pkg-builder.dan.net.uk] `-- Extracting py311-certifi-2025.1.31: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-contourpy-1.3.2... [pkg-builder.dan.net.uk] `-- Extracting py311-contourpy-1.3.2: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-cycler-0.12.1... 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[pkg-builder.dan.net.uk] | `-- Extracting jpeg-turbo-3.1.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing lcms2-2.17... [pkg-builder.dan.net.uk] | | `-- Installing tiff-4.7.0... [pkg-builder.dan.net.uk] | | `-- Installing jbigkit-2.1_3... [pkg-builder.dan.net.uk] | | `-- Extracting jbigkit-2.1_3: .......... done [pkg-builder.dan.net.uk] | | `-- Installing lerc-4.0.0... [pkg-builder.dan.net.uk] | | `-- Extracting lerc-4.0.0: ..... done [pkg-builder.dan.net.uk] | | `-- Installing libdeflate-1.22... [pkg-builder.dan.net.uk] | | `-- Extracting libdeflate-1.22: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting tiff-4.7.0: .......... done [pkg-builder.dan.net.uk] | `-- Extracting lcms2-2.17: .......... done [pkg-builder.dan.net.uk] | `-- Installing libimagequant-4.3.4_2... [pkg-builder.dan.net.uk] | `-- Extracting libimagequant-4.3.4_2: ...... done [pkg-builder.dan.net.uk] | `-- Installing libraqm-0.10.2... [pkg-builder.dan.net.uk] | | `-- Installing fribidi-1.0.16... 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[pkg-builder.dan.net.uk] | | | `-- Extracting libXfixes-6.0.1: ....... done [pkg-builder.dan.net.uk] | | `-- Extracting libXi-1.8.1,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXrandr-1.5.4... [pkg-builder.dan.net.uk] | | `-- Extracting libXrandr-1.5.4: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXxf86vm-1.1.5... [pkg-builder.dan.net.uk] | | `-- Extracting libXxf86vm-1.1.5: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting freeglut-3.2.1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing giflib-5.2.2... [pkg-builder.dan.net.uk] | | `-- Extracting giflib-5.2.2: .......... done [pkg-builder.dan.net.uk] | `-- Extracting webp-1.5.0: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-pillow-11.0.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pluggy-1.5.0... [pkg-builder.dan.net.uk] `-- Extracting py311-pluggy-1.5.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pyparsing-3.2.3... [pkg-builder.dan.net.uk] `-- Extracting py311-pyparsing-3.2.3: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-tornado-6.4... [pkg-builder.dan.net.uk] `-- Extracting py311-tornado-6.4: .......... done [pkg-builder.dan.net.uk] `-- Installing qhull-8.0.2_3,1... [pkg-builder.dan.net.uk] `-- Extracting qhull-8.0.2_3,1: .......... done [pkg-builder.dan.net.uk] Extracting py311-matplotlib-3.8.0_1: .......... done ==> Running trigger: fontconfig.ucl Running fc-cache to build fontconfig cache... ==> Running trigger: gio-modules.ucl Generating GIO modules cache ==> Running trigger: glib-schemas.ucl Compiling glib schemas No schema files found: doing nothing. ===== Message from freetype2-2.13.3: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed). ===== Message from libimagequant-4.3.4_2: -- ===> NOTICE: The libimagequant port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from libinotify-20240724_1: -- You might want to consider increasing the kern.maxfiles tunable if you plan to use this library for applications that need to monitor activity of a lot of files. ===== Message from freeglut-3.2.1: -- Joystick support is untested and it is unknown if it works. Do not hesitate to contact x11@FreeBSD.org if this causes issues. ===> py311-scikit-bio-0.6.3 depends on package: py311-matplotlib>=1.4.3 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-natsort>=4.0.3 - not found ===> Installing existing package /packages/All/py311-natsort-8.4.0_1.pkg [pkg-builder.dan.net.uk] Installing py311-natsort-8.4.0_1... [pkg-builder.dan.net.uk] Extracting py311-natsort-8.4.0_1: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-natsort>=4.0.3 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> py311-scikit-bio-0.6.3 depends on package: py311-pandas>=1.5.0 - found ===> py311-scikit-bio-0.6.3 depends on package: py311-requests>=2.20.0 - not found ===> Installing existing package /packages/All/py311-requests-2.32.3.pkg [pkg-builder.dan.net.uk] Installing py311-requests-2.32.3... [pkg-builder.dan.net.uk] `-- Installing py311-charset-normalizer-3.4.1_1... [pkg-builder.dan.net.uk] `-- Extracting py311-charset-normalizer-3.4.1_1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-idna-3.10... [pkg-builder.dan.net.uk] `-- Extracting py311-idna-3.10: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pysocks-1.7.1_1... [pkg-builder.dan.net.uk] `-- Extracting py311-pysocks-1.7.1_1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-urllib3-1.26.20,1... [pkg-builder.dan.net.uk] | `-- Installing py311-cryptography-44.0.2,1... [pkg-builder.dan.net.uk] | | `-- Installing py311-cffi-1.17.1... [pkg-builder.dan.net.uk] | | `-- Installing py311-pycparser-2.22... [pkg-builder.dan.net.uk] | | `-- Extracting py311-pycparser-2.22: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting py311-cffi-1.17.1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-cryptography-44.0.2,1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-openssl-25.0.0_1,1... [pkg-builder.dan.net.uk] | | `-- Installing py311-typing-extensions-4.13.2... [pkg-builder.dan.net.uk] | | `-- Extracting py311-typing-extensions-4.13.2: ....... done [pkg-builder.dan.net.uk] | `-- Extracting py311-openssl-25.0.0_1,1: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-urllib3-1.26.20,1: .......... done [pkg-builder.dan.net.uk] Extracting py311-requests-2.32.3: .......... done ===== Message from py311-urllib3-1.26.20,1: -- Since version 1.25 HTTPS connections are now verified by default which is done via "cert_reqs = 'CERT_REQUIRED'". While certificate verification can be disabled via "cert_reqs = 'CERT_NONE'", it's highly recommended to leave it on. Various consumers of net/py-urllib3 already have implemented routines that either explicitly enable or disable HTTPS certificate verification (e.g. via configuration settings, CLI arguments, etc.). Yet it may happen that there are still some consumers which don't explicitly enable/disable certificate verification for HTTPS connections which could then lead to errors (as is often the case with self-signed certificates). In case of an error one should try first to temporarily disable certificate verification of the problematic urllib3 consumer to see if that approach will remedy the issue. ===> py311-scikit-bio-0.6.3 depends on package: py311-requests>=2.20.0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-scikit-learn>=0.19.1 - not found ===> Installing existing package /packages/All/py311-scikit-learn-1.4.0_1.pkg [pkg-builder.dan.net.uk] Installing py311-scikit-learn-1.4.0_1... [pkg-builder.dan.net.uk] `-- Installing py311-joblib-1.3.2_2... [pkg-builder.dan.net.uk] `-- Extracting py311-joblib-1.3.2_2: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-threadpoolctl-3.6.0... [pkg-builder.dan.net.uk] `-- Extracting py311-threadpoolctl-3.6.0: ....... done [pkg-builder.dan.net.uk] Extracting py311-scikit-learn-1.4.0_1: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-scikit-learn>=0.19.1 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on package: py311-scipy>=1.9.0 - found ===> py311-scikit-bio-0.6.3 depends on package: py311-statsmodels>=0.14.0 - not found ===> Installing existing package /packages/All/py311-statsmodels-0.14.1.pkg [pkg-builder.dan.net.uk] Installing py311-statsmodels-0.14.1... [pkg-builder.dan.net.uk] `-- Installing py311-patsy-1.0.1... [pkg-builder.dan.net.uk] `-- Extracting py311-patsy-1.0.1: .......... done [pkg-builder.dan.net.uk] Extracting py311-statsmodels-0.14.1: .......... done ===> py311-scikit-bio-0.6.3 depends on package: py311-statsmodels>=0.14.0 - found ===> Returning to build of py311-scikit-bio-0.6.3 ===> py311-scikit-bio-0.6.3 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for py311-scikit-bio-0.6.3 ===> Generating temporary packing list ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2025-05-06T21:24:18+0000' 'PKG_NOTE_ports_top_git_hash=5529c5919b' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=08fa8f9c4b' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for py311-scikit-bio-0.6.3 ===> Building py311-scikit-bio-0.6.3 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-scikit-bio-0.6.3 build of biology/py-scikit-bio@py311 | py311-scikit-bio-0.6.3 ended at Tue May 6 22:29:48 BST 2025 build time: 00:05:31