=>> Building math/py-rpy2 build started at Wed May 7 21:03:35 BST 2025 port directory: /usr/ports/math/py-rpy2 package name: py311-rpy2-3.5.17_1 building for: FreeBSD pkg-builder.dan.net.uk 14.2-RELEASE FreeBSD 14.2-RELEASE amd64 maintained by: sunpoet@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1439 Apr 12 14:06 /usr/ports/math/py-rpy2/Makefile Ports top last git commit: 5529c5919b Ports top unclean checkout: yes Port dir last git commit: d15a9ca531 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1402000 Jail OSVERSION: 1402000 Job Id: 02 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1402000 UNAME_v=FreeBSD 14.2-RELEASE UNAME_r=14.2-RELEASE BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/14-amd64-default-dan/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/14-amd64-default-dan/02/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=14-amd64-default-dan SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/14-amd64-default-dan/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for py311-rpy2-3.5.17_1: NUMPY=on: NumPy mathematical computing support PANDAS=on: Pandas support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- sunpoet@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311/.cache HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/py-rpy2/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/py-rpy2/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- RPY2_CFFI_MODE=BOTH F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311/.cache HOME=/wrkdirs/usr/ports/math/py-rpy2/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/py-rpy2/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/py-rpy2/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -L/usr/local/lib -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/py311-rpy2" EXAMPLESDIR="share/examples/py311-rpy2" DATADIR="share/py311-rpy2" WWWDIR="www/py311-rpy2" ETCDIR="etc/py311-rpy2" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py311-rpy2 DOCSDIR=/usr/local/share/doc/py311-rpy2 EXAMPLESDIR=/usr/local/share/examples/py311-rpy2 WWWDIR=/usr/local/www/py311-rpy2 ETCDIR=/usr/local/etc/py311-rpy2 --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### CCACHE_CPP2=1 WITH_SSP_PORTS=yes WITH_SSP=yes #WITH_LTO=yes DISABLE_LICENSES=yes LICENSES_ACCEPTED=AGPLv3 APACHE10 APACHE11 APACHE20 ART10 ARTPERL10 ART20 BSD BSD2CLAUSE BSD3CLAUSE BSD4CLAUSE BSL CC0-1.0 CDDL ClArtistic EPL GFDL GMGPL GPLv1 GPLv2 GPLv3 GPLv3RLE ISCL LGPL20 LGPL21 LGPL3 LPPL10 LPPL11 LPPL12 LPPL13 LPPL13a LPPL13b LPPL13c MIT MPL OpenSSL OFL10 OFL11 OWL PostgreSQL PHP202 PHP30 PHP301 PSFL RUBY ZLIB ZPL21 SVM-Light EULA ALASIR Microsoft-exFAT SIMIAN UDEVGAME unknown MTA COMMERCIAL teamspeak NO_LICENSES_DIALOGS=yes #### #### NO_IGNORE=yes DEFAULT_VERSIONS+=ssl=openssl apache=2.4 imagemagick=7 java=21 linux=c7 mysql=8.0 php=8.3 samba=4.19 varnish=7 WITH_SETID_MODE=force PHP_ZTS=enabled OPTIONS_UNSET+=OPENJPEG OPTIONS_UNSET+=GSSAPI_BASE OPTIONS_SET+=ZTS OPTIONS_SET+=GSSAPI_NONE ALLOW_UNSUPPORTED_SYSTEM=yes WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rpy2-3.5.17_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.1.2.pkg [pkg-builder.dan.net.uk] Installing pkg-2.1.2... [pkg-builder.dan.net.uk] Extracting pkg-2.1.2: .......... done ===> py311-rpy2-3.5.17_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-rpy2-3.5.17_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-rpy2-3.5.17_1 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-rpy2-3.5.17_1 for building => SHA256 Checksum OK for rpy2-3.5.17.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-rpy2-3.5.17_1 for building ===> Extracting for py311-rpy2-3.5.17_1 => SHA256 Checksum OK for rpy2-3.5.17.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-rpy2-3.5.17_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rpy2-3.5.17_1 depends on package: py311-cffi>=1.15.0 - not found ===> Installing existing package /packages/All/py311-cffi-1.17.1.pkg [pkg-builder.dan.net.uk] Installing py311-cffi-1.17.1... [pkg-builder.dan.net.uk] `-- Installing libffi-3.4.8... [pkg-builder.dan.net.uk] | `-- Installing indexinfo-0.3.1_1... [pkg-builder.dan.net.uk] | `-- Extracting indexinfo-0.3.1_1: . done [pkg-builder.dan.net.uk] `-- Extracting libffi-3.4.8: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pycparser-2.22... [pkg-builder.dan.net.uk] | `-- Installing python311-3.11.12... [pkg-builder.dan.net.uk] | | `-- Installing gettext-runtime-0.23.1... [pkg-builder.dan.net.uk] | | `-- Extracting gettext-runtime-0.23.1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing mpdecimal-4.0.0... [pkg-builder.dan.net.uk] | | `-- Extracting mpdecimal-4.0.0: .......... done [pkg-builder.dan.net.uk] | | `-- Installing openssl-3.0.16,1... [pkg-builder.dan.net.uk] | | `-- Extracting openssl-3.0.16,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing readline-8.2.13_2... [pkg-builder.dan.net.uk] | | `-- Extracting readline-8.2.13_2: .......... done [pkg-builder.dan.net.uk] | `-- Extracting python311-3.11.12: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-pycparser-2.22: .......... done [pkg-builder.dan.net.uk] Extracting py311-cffi-1.17.1: .......... done ===== Message from python311-3.11.12: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-rpy2-3.5.17_1 depends on package: py311-cffi>=1.15.0 - found ===> Returning to build of py311-rpy2-3.5.17_1 ===> py311-rpy2-3.5.17_1 depends on package: py311-setuptools>=61 - not found ===> Installing existing package /packages/All/py311-setuptools-63.1.0_3.pkg [pkg-builder.dan.net.uk] Installing py311-setuptools-63.1.0_3... 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[pkg-builder.dan.net.uk] | `-- Extracting mpfr-4.2.2,1: .......... done [pkg-builder.dan.net.uk] `-- Extracting mpc-1.3.1_1: ...... done [pkg-builder.dan.net.uk] Extracting gcc13-13.3.0_2: .......... done ===== Message from gcc13-13.3.0_2: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> py311-rpy2-3.5.17_1 depends on executable: gfortran13 - found ===> Returning to build of py311-rpy2-3.5.17_1 ===> py311-rpy2-3.5.17_1 depends on file: /usr/local/bin/python3.11 - found ===> py311-rpy2-3.5.17_1 depends on file: /usr/local/bin/as - found ===> py311-rpy2-3.5.17_1 depends on package: py311-build>=0 - not found ===> Installing existing package /packages/All/py311-build-1.2.2_2.pkg [pkg-builder.dan.net.uk] Installing py311-build-1.2.2_2... 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[pkg-builder.dan.net.uk] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc13 create symlink for gcc13 (world) create symlink for g++13 create symlink for g++13 (world) create symlink for cpp13 create symlink for cpp13 (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> py311-rpy2-3.5.17_1 depends on file: /usr/local/bin/ccache - found ===> Returning to build of py311-rpy2-3.5.17_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rpy2-3.5.17_1 depends on shared library: libR.so - not found ===> Installing existing package /packages/All/R-4.4.3.pkg [pkg-builder.dan.net.uk] Installing R-4.4.3... [pkg-builder.dan.net.uk] `-- Installing cairo-1.18.2,3... [pkg-builder.dan.net.uk] | `-- Installing fontconfig-2.15.0_3,1... [pkg-builder.dan.net.uk] | | `-- Installing expat-2.7.1... [pkg-builder.dan.net.uk] | | `-- Extracting expat-2.7.1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing freetype2-2.13.3... [pkg-builder.dan.net.uk] | | `-- Extracting freetype2-2.13.3: .......... done [pkg-builder.dan.net.uk] | `-- Extracting fontconfig-2.15.0_3,1: .......... done [pkg-builder.dan.net.uk] | `-- Installing glib-2.84.1_2,2... [pkg-builder.dan.net.uk] | | `-- Installing libiconv-1.17_1... [pkg-builder.dan.net.uk] | | `-- Extracting libiconv-1.17_1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libinotify-20240724_1... [pkg-builder.dan.net.uk] | | `-- Extracting libinotify-20240724_1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing pcre2-10.45_1... 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[pkg-builder.dan.net.uk] `-- Extracting tk86-8.6.16: .......... done [pkg-builder.dan.net.uk] Extracting R-4.4.3: .......... done ==> Running trigger: fontconfig.ucl Running fc-cache to build fontconfig cache... ==> Running trigger: gio-modules.ucl Generating GIO modules cache ==> Running trigger: glib-schemas.ucl Compiling glib schemas No schema files found: doing nothing. ===== Message from freetype2-2.13.3: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed). ===== Message from libinotify-20240724_1: -- You might want to consider increasing the kern.maxfiles tunable if you plan to use this library for applications that need to monitor activity of a lot of files. ===== Message from ghostscript10-10.05.0_1: -- This package installs a script named dvipdf that depends on dvips. If you want to use this script you need to install print/tex-dvipsk. ===> py311-rpy2-3.5.17_1 depends on shared library: libR.so - found (/usr/local/lib/R/lib/libR.so) ===> Returning to build of py311-rpy2-3.5.17_1 ===> py311-rpy2-3.5.17_1 depends on shared library: libicui18n.so - found (/usr/local/lib/libicui18n.so) ===> py311-rpy2-3.5.17_1 depends on shared library: libpcre2-8.so - found (/usr/local/lib/libpcre2-8.so) ===> py311-rpy2-3.5.17_1 depends on shared library: libreadline.so.8 - found (/usr/local/lib/libreadline.so.8) =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-rpy2-3.5.17_1 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-rpy2-3.5.17_1 * Getting build dependencies for wheel... cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/local/lib/R R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -L/usr/local/lib -fstack-protector-strong -L/usr/local/lib/R/lib -lR -L/usr/local/lib -L/usr/local/lib -lpcre2-8 -ldeflate -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config BLAS_LIBS ['-L/usr/local/lib/R/lib -lRblas', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --cppflags ['-I/usr/local/lib/R/include', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config LIBnn ['lib', ''] cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/local/lib/R R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -L/usr/local/lib -fstack-protector-strong -L/usr/local/lib/R/lib -lR -L/usr/local/lib -L/usr/local/lib -lpcre2-8 -ldeflate -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config BLAS_LIBS ['-L/usr/local/lib/R/lib -lRblas', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --cppflags ['-I/usr/local/lib/R/include', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config LIBnn ['lib', ''] /usr/local/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:104: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. warnings.warn(msg, _BetaConfiguration) running egg_info writing rpy2.egg-info/PKG-INFO writing dependency_links to rpy2.egg-info/dependency_links.txt writing requirements to rpy2.egg-info/requires.txt writing top-level names to rpy2.egg-info/top_level.txt reading manifest file 'rpy2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README' anywhere in distribution warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution warning: no files found matching 'MANIFEST' warning: no files found matching '_rinterface_cffi_build' warning: no files found matching 'rpy/__init__.py' warning: no files found matching 'rpy/situation.py' warning: no files found matching '*.py' under directory 'rpy/robjects' warning: no files found matching '*.py' under directory 'rpy/ipython' warning: no files found matching '*.py' under directory 'rpy/interactive' warning: no files found matching '*.py' under directory 'rpy/rlike' no previously-included directories found matching 'dist' warning: no files found matching 'doc/source/rpy2_logo.png' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'rpy2.egg-info/SOURCES.txt' * Building wheel... cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/local/lib/R R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -L/usr/local/lib -fstack-protector-strong -L/usr/local/lib/R/lib -lR -L/usr/local/lib -L/usr/local/lib -lpcre2-8 -ldeflate -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config BLAS_LIBS ['-L/usr/local/lib/R/lib -lRblas', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --cppflags ['-I/usr/local/lib/R/include', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config LIBnn ['lib', ''] cffi mode is CFFI_MODE.ANY Looking for R home with: R RHOME R home found: /usr/local/lib/R R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --ldflags ['-Wl,--export-dynamic -fopenmp -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -L/usr/local/lib -fstack-protector-strong -L/usr/local/lib/R/lib -lR -L/usr/local/lib -L/usr/local/lib -lpcre2-8 -ldeflate -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config BLAS_LIBS ['-L/usr/local/lib/R/lib -lRblas', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config --cppflags ['-I/usr/local/lib/R/include', ''] R exec path: /usr/local/lib/R/bin/R Looking for R CONFIG with: /usr/local/lib/R/bin/R CMD config LIBnn ['lib', ''] /usr/local/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py:104: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*. warnings.warn(msg, _BetaConfiguration) running bdist_wheel running build cffi mode: CFFI_MODE.BOTH running build_py file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found creating build creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311 creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2 copying rpy2/_rinterface_cffi_build.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2 copying rpy2/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2 copying rpy2/situation.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2 copying rpy2/rinterface.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2 creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike copying rpy2/rlike/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike copying rpy2/rlike/functional.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike copying rpy2/rlike/indexing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike copying rpy2/rlike/container.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/openrlib.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/bufferprotocol.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/memorymanagement.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/sexp.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/conversion.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/ffi_proxy.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/embedded.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/embedded_mswin.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/callbacks.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/na_values.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/_rinterface_capi.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/numpy2ri.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/vectors.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/packages.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/robject.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/functions.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/environments.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/conversion.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/pandas2ri.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/constants.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/language.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/help.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/methods.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects copying rpy2/robjects/packages_utils.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib copying rpy2/robjects/lib/grdevices.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib copying rpy2/robjects/lib/grid.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib copying rpy2/robjects/lib/tidyr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib copying rpy2/robjects/lib/ggplot2.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib copying rpy2/robjects/lib/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib copying rpy2/robjects/lib/dplyr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib copying rpy2/robjects/lib/dbplyr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/interactive copying rpy2/interactive/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/interactive copying rpy2/interactive/packages.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/interactive copying rpy2/interactive/process_revents.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/interactive creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython copying rpy2/ipython/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython copying rpy2/ipython/rmagic.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython copying rpy2/ipython/html.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython copying rpy2/ipython/ggplot.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests copying rpy2/tests/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests copying rpy2/tests/utils.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_embedded_r.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_noinitialization.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_conversion.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_lang.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_memorymanagement.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_externalptr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_bufferprotocol.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_symbol.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_numpy.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_callbacks.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_list.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_bool.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_threading.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_pairlist.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_complex.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_endr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_byte.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_int.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_na.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_functions.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_float.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_sexp.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vectors.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_environment.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_vector_str.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface copying rpy2/tests/rinterface/test_openrlib.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rlike copying rpy2/tests/rlike/test_functional.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rlike copying rpy2/tests/rlike/test_indexing.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rlike copying rpy2/tests/rlike/test_container.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rlike creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_conversion.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector_extractdelegator.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_function.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_language.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_rs4.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_help.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_formula.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_serialization.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_robjects.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_conversion_numpy.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector_factor.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_packages.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_packages_utils.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_dataframe.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_translated_function.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_pandas_conversions.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_array.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_environment.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_methods.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects copying rpy2/tests/robjects/test_vector_datetime.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython copying rpy2/tests/ipython/test_ggplot.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython copying rpy2/tests/ipython/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython copying rpy2/tests/ipython/test_rmagic.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython copying rpy2/tests/ipython/test_html.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython creating build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_dbplyr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/__init__.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_ggplot2.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_grid.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_dplyr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_grdevices.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib copying rpy2/tests/robjects/lib/test_tidyr.py -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib running egg_info writing rpy2.egg-info/PKG-INFO writing dependency_links to rpy2.egg-info/dependency_links.txt writing requirements to rpy2.egg-info/requires.txt writing top-level names to rpy2.egg-info/top_level.txt reading manifest file 'rpy2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README' anywhere in distribution warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution warning: no files found matching 'MANIFEST' warning: no files found matching '_rinterface_cffi_build' warning: no files found matching 'rpy/__init__.py' warning: no files found matching 'rpy/situation.py' warning: no files found matching '*.py' under directory 'rpy/robjects' warning: no files found matching '*.py' under directory 'rpy/ipython' warning: no files found matching '*.py' under directory 'rpy/interactive' warning: no files found matching '*.py' under directory 'rpy/rlike' no previously-included directories found matching 'dist' warning: no files found matching 'doc/source/rpy2_logo.png' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'rpy2.egg-info/SOURCES.txt' copying rpy2/rinterface_lib/R_API.h -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/R_API_eventloop.h -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/R_API_eventloop.c -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/RPY2.h -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib copying rpy2/rinterface_lib/_bufferprotocol.c -> build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found generating cffi module 'build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_abi.py' running build_ext generating cffi module 'build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_api.c' creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311 building '_rinterface_cffi_api' extension creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/build creating build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/build/temp.freebsd-14.2-RELEASE-amd64-cpython-311 cc -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include -fPIC -DRPY2_RLEN_LONG=True -DR_INTERFACE_PTRS=True -Irpy2/rinterface_lib/ -I/usr/local/include/python3.11 -c build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_api.c -o build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_api.o -std=c99 In file included from build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_api.c:574: rpy2/rinterface_lib/R_API_eventloop.h:29:3: warning: redefinition of typedef 'InputHandler' is a C11 feature [-Wtypedef-redefinition] 29 | } InputHandler; | ^ rpy2/rinterface_lib/R_API_eventloop.h:11:30: note: previous definition is here 11 | typedef struct _InputHandler InputHandler; | ^ 1 warning generated. cc -shared -L/usr/local/lib -Wl,-rpath,/usr/local/lib -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -L/usr/local/lib -fstack-protector-strong -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/build/temp.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_api.o -L/usr/local/lib/gcc13 -L/usr/local/lib -L/usr/local/lib/R/lib -L/usr/local/lib -L/usr/local/lib -L/usr/local/lib/R/lib -L/usr/local/lib -lR -lpcre2-8 -ldeflate -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lRblas -o build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_api.abi3.so -Wl,--export-dynamic -fopenmp -Wl,-rpath=/usr/local/lib/gcc13 -fstack-protector-strong -Wl,-rpath,/usr/local/lib/R/lib --- CFFI_MODE.BOTH ABI mode interface built. API mode interface built. To change the API/ABI build mode, set or modify the environment variable RPY2_CFFI_MODE. installing to build/bdist.freebsd-14.2-RELEASE-amd64/wheel running install running install_lib creating build/bdist.freebsd-14.2-RELEASE-amd64 creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_abi.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2 creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_embedded_r.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_noinitialization.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_conversion.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_lang.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_memorymanagement.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_externalptr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_bufferprotocol.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_symbol.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_numpy.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_callbacks.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_list.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_bool.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_threading.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_pairlist.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_complex.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_endr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_byte.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_int.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_na.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_functions.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_float.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_sexp.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vectors.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_environment.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_vector_str.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rinterface/test_openrlib.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rinterface copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_conversion.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_vector_extractdelegator.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib/test_dbplyr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib/test_ggplot2.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib/test_grid.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib/test_dplyr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib/test_grdevices.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/lib/test_tidyr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_function.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_language.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_rs4.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_help.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_formula.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_vector.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_serialization.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_robjects.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_conversion_numpy.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_vector_factor.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_packages.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_packages_utils.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_dataframe.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_translated_function.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_pandas_conversions.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_array.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_environment.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_methods.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/robjects/test_vector_datetime.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/robjects creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython/test_ggplot.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython/test_rmagic.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/ipython/test_html.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/utils.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rlike/test_functional.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rlike/test_indexing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/tests/rlike/test_container.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/tests/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/_rinterface_cffi_build.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2 copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2 creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/numpy2ri.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/vectors.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib/grdevices.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib/grid.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib/tidyr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib/ggplot2.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib/dplyr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/lib/dbplyr.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects/lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/packages.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/robject.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/functions.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/environments.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/conversion.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/pandas2ri.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/constants.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/language.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/help.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/methods.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/robjects/packages_utils.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/robjects copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/situation.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2 creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython/rmagic.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython/html.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/ipython copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/ipython/ggplot.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/ipython creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/interactive copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/interactive/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/interactive copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/interactive/packages.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/interactive copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/interactive/process_revents.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/interactive copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2 creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike/functional.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike/indexing.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rlike copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rlike/container.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rlike creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/R_API_eventloop.c -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/R_API_eventloop.h -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/_bufferprotocol.c -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/openrlib.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/bufferprotocol.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/memorymanagement.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/__init__.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/sexp.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/conversion.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/ffi_proxy.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/embedded.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/RPY2.h -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/embedded_mswin.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/callbacks.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/R_API.h -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/na_values.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/rpy2/rinterface_lib/_rinterface_capi.py -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2/rinterface_lib copying build/lib.freebsd-14.2-RELEASE-amd64-cpython-311/_rinterface_cffi_api.abi3.so -> build/bdist.freebsd-14.2-RELEASE-amd64/wheel running install_egg_info Copying rpy2.egg-info to build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2-3.5.17-py3.11.egg-info running install_scripts creating build/bdist.freebsd-14.2-RELEASE-amd64/wheel/rpy2-3.5.17.dist-info/WHEEL creating '/wrkdirs/usr/ports/math/py-rpy2/work-py311/rpy2-3.5.17/dist/tmpc4_d2kf0/rpy2-3.5.17-cp311-cp311-freebsd_14_2_release_amd64.whl' and adding 'build/bdist.freebsd-14.2-RELEASE-amd64/wheel' to it adding '_rinterface_cffi_abi.py' adding '_rinterface_cffi_api.abi3.so' adding 'rpy2/__init__.py' adding 'rpy2/_rinterface_cffi_build.py' adding 'rpy2/rinterface.py' adding 'rpy2/situation.py' adding 'rpy2/interactive/__init__.py' adding 'rpy2/interactive/packages.py' adding 'rpy2/interactive/process_revents.py' adding 'rpy2/ipython/__init__.py' adding 'rpy2/ipython/ggplot.py' adding 'rpy2/ipython/html.py' adding 'rpy2/ipython/rmagic.py' adding 'rpy2/rinterface_lib/RPY2.h' adding 'rpy2/rinterface_lib/R_API.h' adding 'rpy2/rinterface_lib/R_API_eventloop.c' adding 'rpy2/rinterface_lib/R_API_eventloop.h' adding 'rpy2/rinterface_lib/__init__.py' adding 'rpy2/rinterface_lib/_bufferprotocol.c' adding 'rpy2/rinterface_lib/_rinterface_capi.py' adding 'rpy2/rinterface_lib/bufferprotocol.py' adding 'rpy2/rinterface_lib/callbacks.py' adding 'rpy2/rinterface_lib/conversion.py' adding 'rpy2/rinterface_lib/embedded.py' adding 'rpy2/rinterface_lib/embedded_mswin.py' adding 'rpy2/rinterface_lib/ffi_proxy.py' adding 'rpy2/rinterface_lib/memorymanagement.py' adding 'rpy2/rinterface_lib/na_values.py' adding 'rpy2/rinterface_lib/openrlib.py' adding 'rpy2/rinterface_lib/sexp.py' adding 'rpy2/rlike/__init__.py' adding 'rpy2/rlike/container.py' adding 'rpy2/rlike/functional.py' adding 'rpy2/rlike/indexing.py' adding 'rpy2/robjects/__init__.py' adding 'rpy2/robjects/constants.py' adding 'rpy2/robjects/conversion.py' adding 'rpy2/robjects/environments.py' adding 'rpy2/robjects/functions.py' adding 'rpy2/robjects/help.py' adding 'rpy2/robjects/language.py' adding 'rpy2/robjects/methods.py' adding 'rpy2/robjects/numpy2ri.py' adding 'rpy2/robjects/packages.py' adding 'rpy2/robjects/packages_utils.py' adding 'rpy2/robjects/pandas2ri.py' adding 'rpy2/robjects/robject.py' adding 'rpy2/robjects/vectors.py' adding 'rpy2/robjects/lib/__init__.py' adding 'rpy2/robjects/lib/dbplyr.py' adding 'rpy2/robjects/lib/dplyr.py' adding 'rpy2/robjects/lib/ggplot2.py' adding 'rpy2/robjects/lib/grdevices.py' adding 'rpy2/robjects/lib/grid.py' adding 'rpy2/robjects/lib/tidyr.py' adding 'rpy2/tests/__init__.py' adding 'rpy2/tests/utils.py' adding 'rpy2/tests/ipython/__init__.py' adding 'rpy2/tests/ipython/test_ggplot.py' adding 'rpy2/tests/ipython/test_html.py' adding 'rpy2/tests/ipython/test_rmagic.py' adding 'rpy2/tests/rinterface/__init__.py' adding 'rpy2/tests/rinterface/test_bufferprotocol.py' adding 'rpy2/tests/rinterface/test_callbacks.py' adding 'rpy2/tests/rinterface/test_conversion.py' adding 'rpy2/tests/rinterface/test_embedded_r.py' adding 'rpy2/tests/rinterface/test_endr.py' adding 'rpy2/tests/rinterface/test_environment.py' adding 'rpy2/tests/rinterface/test_externalptr.py' adding 'rpy2/tests/rinterface/test_functions.py' adding 'rpy2/tests/rinterface/test_memorymanagement.py' adding 'rpy2/tests/rinterface/test_na.py' adding 'rpy2/tests/rinterface/test_noinitialization.py' adding 'rpy2/tests/rinterface/test_openrlib.py' adding 'rpy2/tests/rinterface/test_sexp.py' adding 'rpy2/tests/rinterface/test_symbol.py' adding 'rpy2/tests/rinterface/test_threading.py' adding 'rpy2/tests/rinterface/test_vector_bool.py' adding 'rpy2/tests/rinterface/test_vector_byte.py' adding 'rpy2/tests/rinterface/test_vector_complex.py' adding 'rpy2/tests/rinterface/test_vector_float.py' adding 'rpy2/tests/rinterface/test_vector_int.py' adding 'rpy2/tests/rinterface/test_vector_lang.py' adding 'rpy2/tests/rinterface/test_vector_list.py' adding 'rpy2/tests/rinterface/test_vector_numpy.py' adding 'rpy2/tests/rinterface/test_vector_pairlist.py' adding 'rpy2/tests/rinterface/test_vector_str.py' adding 'rpy2/tests/rinterface/test_vectors.py' adding 'rpy2/tests/rlike/test_container.py' adding 'rpy2/tests/rlike/test_functional.py' adding 'rpy2/tests/rlike/test_indexing.py' adding 'rpy2/tests/robjects/__init__.py' adding 'rpy2/tests/robjects/test_array.py' adding 'rpy2/tests/robjects/test_conversion.py' adding 'rpy2/tests/robjects/test_conversion_numpy.py' adding 'rpy2/tests/robjects/test_dataframe.py' adding 'rpy2/tests/robjects/test_environment.py' adding 'rpy2/tests/robjects/test_formula.py' adding 'rpy2/tests/robjects/test_function.py' adding 'rpy2/tests/robjects/test_help.py' adding 'rpy2/tests/robjects/test_language.py' adding 'rpy2/tests/robjects/test_methods.py' adding 'rpy2/tests/robjects/test_packages.py' adding 'rpy2/tests/robjects/test_packages_utils.py' adding 'rpy2/tests/robjects/test_pandas_conversions.py' adding 'rpy2/tests/robjects/test_robjects.py' adding 'rpy2/tests/robjects/test_rs4.py' adding 'rpy2/tests/robjects/test_serialization.py' adding 'rpy2/tests/robjects/test_translated_function.py' adding 'rpy2/tests/robjects/test_vector.py' adding 'rpy2/tests/robjects/test_vector_datetime.py' adding 'rpy2/tests/robjects/test_vector_extractdelegator.py' adding 'rpy2/tests/robjects/test_vector_factor.py' adding 'rpy2/tests/robjects/lib/__init__.py' adding 'rpy2/tests/robjects/lib/test_dbplyr.py' adding 'rpy2/tests/robjects/lib/test_dplyr.py' adding 'rpy2/tests/robjects/lib/test_ggplot2.py' adding 'rpy2/tests/robjects/lib/test_grdevices.py' adding 'rpy2/tests/robjects/lib/test_grid.py' adding 'rpy2/tests/robjects/lib/test_tidyr.py' adding 'rpy2-3.5.17.dist-info/AUTHORS' adding 'rpy2-3.5.17.dist-info/LICENSE' adding 'rpy2-3.5.17.dist-info/METADATA' adding 'rpy2-3.5.17.dist-info/WHEEL' adding 'rpy2-3.5.17.dist-info/top_level.txt' adding 'rpy2-3.5.17.dist-info/RECORD' removing build/bdist.freebsd-14.2-RELEASE-amd64/wheel Successfully built rpy2-3.5.17-cp311-cp311-freebsd_14_2_release_amd64.whl =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-rpy2-3.5.17_1 depends on package: py311-cffi>=1.15.1 - found ===> py311-rpy2-3.5.17_1 depends on package: py311-Jinja2>=0 - not found ===> Installing existing package /packages/All/py311-Jinja2-3.1.6.pkg [pkg-builder.dan.net.uk] Installing py311-Jinja2-3.1.6... 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[pkg-builder.dan.net.uk] | `-- Extracting py311-tzdata-2025.2: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-pytz-deprecation-shim-0.1.0.post0_3: .......... done [pkg-builder.dan.net.uk] Extracting py311-tzlocal-5.2: .......... done ===> py311-rpy2-3.5.17_1 depends on package: py311-tzlocal>=0 - found ===> Returning to build of py311-rpy2-3.5.17_1 ===> py311-rpy2-3.5.17_1 depends on package: py311-numpy>=1.26,1 - not found ===> Installing existing package /packages/All/py311-numpy-1.26.4_6,1.pkg [pkg-builder.dan.net.uk] Installing py311-numpy-1.26.4_6,1... [pkg-builder.dan.net.uk] `-- Installing openblas-0.3.29_1,2... [pkg-builder.dan.net.uk] `-- Extracting openblas-0.3.29_1,2: .......... done [pkg-builder.dan.net.uk] `-- Installing suitesparse-umfpack-6.3.5_1... [pkg-builder.dan.net.uk] | `-- Installing suitesparse-amd-3.3.3... [pkg-builder.dan.net.uk] | | `-- Installing suitesparse-config-7.10.2... [pkg-builder.dan.net.uk] | | `-- Extracting suitesparse-config-7.10.2: .......... done [pkg-builder.dan.net.uk] | `-- Extracting suitesparse-amd-3.3.3: .......... done [pkg-builder.dan.net.uk] | `-- Installing suitesparse-camd-3.3.3... [pkg-builder.dan.net.uk] | `-- Extracting suitesparse-camd-3.3.3: .......... done [pkg-builder.dan.net.uk] | `-- Installing suitesparse-ccolamd-3.3.4... [pkg-builder.dan.net.uk] | `-- Extracting suitesparse-ccolamd-3.3.4: .......... done [pkg-builder.dan.net.uk] | `-- Installing suitesparse-cholmod-5.3.2... [pkg-builder.dan.net.uk] | | `-- Installing suitesparse-colamd-3.3.4... [pkg-builder.dan.net.uk] | | `-- Extracting suitesparse-colamd-3.3.4: .......... done [pkg-builder.dan.net.uk] | `-- Extracting suitesparse-cholmod-5.3.2: .......... done [pkg-builder.dan.net.uk] `-- Extracting suitesparse-umfpack-6.3.5_1: .......... done [pkg-builder.dan.net.uk] Extracting py311-numpy-1.26.4_6,1: .......... done ===> py311-rpy2-3.5.17_1 depends on package: py311-numpy>=1.26,1 - found ===> Returning to build of py311-rpy2-3.5.17_1 ===> py311-rpy2-3.5.17_1 depends on package: py311-numpy>=1.26,1 - found ===> py311-rpy2-3.5.17_1 depends on package: py311-pandas>=1.3.5,1 - not found ===> Installing existing package /packages/All/py311-pandas-2.2.3,1.pkg [pkg-builder.dan.net.uk] Installing py311-pandas-2.2.3,1... [pkg-builder.dan.net.uk] `-- Installing py311-bottleneck-1.3.8_1... [pkg-builder.dan.net.uk] `-- Extracting py311-bottleneck-1.3.8_1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-numexpr-2.10.2... [pkg-builder.dan.net.uk] `-- Extracting py311-numexpr-2.10.2: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-python-dateutil-2.9.0... [pkg-builder.dan.net.uk] | `-- Installing py311-six-1.17.0... [pkg-builder.dan.net.uk] | `-- Extracting py311-six-1.17.0: ........ done [pkg-builder.dan.net.uk] `-- Extracting py311-python-dateutil-2.9.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pytz-2024.2_1,1... [pkg-builder.dan.net.uk] `-- Extracting py311-pytz-2024.2_1,1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-sqlite3-3.11.12_10... [pkg-builder.dan.net.uk] | `-- Installing sqlite3-3.46.1_1,1... [pkg-builder.dan.net.uk] | | `-- Installing libedit-3.1.20250104,1... [pkg-builder.dan.net.uk] | | `-- Extracting libedit-3.1.20250104,1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting sqlite3-3.46.1_1,1: ......... done [pkg-builder.dan.net.uk] `-- Extracting py311-sqlite3-3.11.12_10: ...... done [pkg-builder.dan.net.uk] Extracting py311-pandas-2.2.3,1: .......... done ===== Message from py311-pandas-2.2.3,1: -- Install math/py-statsmodels to enable parts of pandas.stats. Install devel/py-xarray to enable the to_xarray() function. ===> py311-rpy2-3.5.17_1 depends on package: py311-pandas>=1.3.5,1 - found ===> Returning to build of py311-rpy2-3.5.17_1 ===> py311-rpy2-3.5.17_1 depends on executable: gfortran13 - found ===> py311-rpy2-3.5.17_1 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for py311-rpy2-3.5.17_1 ===> Generating temporary packing list /usr/bin/find /wrkdirs/usr/ports/math/py-rpy2/work-py311/stage/usr/local/lib/python3.11/site-packages -name '*.so' -exec /usr/bin/strip {} + ===> Creating unique files: Move MAN files needing SUFFIX ===> Creating unique files: Move files needing SUFFIX ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2025-05-07T20:03:35+0000' 'PKG_NOTE_ports_top_git_hash=5529c5919b' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=d15a9ca531' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for py311-rpy2-3.5.17_1 ===> Building py311-rpy2-3.5.17_1 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-rpy2-3.5.17_1 build of math/py-rpy2@py311 | py311-rpy2-3.5.17_1 ended at Wed May 7 21:09:02 BST 2025 build time: 00:05:27