=>> Building science/py-PyNE build started at Wed May 7 18:47:01 BST 2025 port directory: /usr/ports/science/py-PyNE package name: py311-PyNE-0.7.8_3 building for: FreeBSD pkg-builder.dan.net.uk 14.2-RELEASE FreeBSD 14.2-RELEASE amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 3354 Mar 13 05:56 /usr/ports/science/py-PyNE/Makefile Ports top last git commit: 5529c5919b Ports top unclean checkout: yes Port dir last git commit: 06a08e69f3 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1402000 Jail OSVERSION: 1402000 Job Id: 01 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1402000 UNAME_v=FreeBSD 14.2-RELEASE UNAME_r=14.2-RELEASE BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/14-amd64-default-dan/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/14-amd64-default-dan/01/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=14-amd64-default-dan SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/14-amd64-default-dan/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- DESTDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/PyNE" EXAMPLESDIR="share/examples/PyNE" DATADIR="share/PyNE" WWWDIR="www/PyNE" ETCDIR="etc/PyNE" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/PyNE DOCSDIR=/usr/local/share/doc/PyNE EXAMPLESDIR=/usr/local/share/examples/PyNE WWWDIR=/usr/local/www/PyNE ETCDIR=/usr/local/etc/PyNE --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### CCACHE_CPP2=1 WITH_SSP_PORTS=yes WITH_SSP=yes #WITH_LTO=yes DISABLE_LICENSES=yes LICENSES_ACCEPTED=AGPLv3 APACHE10 APACHE11 APACHE20 ART10 ARTPERL10 ART20 BSD BSD2CLAUSE BSD3CLAUSE BSD4CLAUSE BSL CC0-1.0 CDDL ClArtistic EPL GFDL GMGPL GPLv1 GPLv2 GPLv3 GPLv3RLE ISCL LGPL20 LGPL21 LGPL3 LPPL10 LPPL11 LPPL12 LPPL13 LPPL13a LPPL13b LPPL13c MIT MPL OpenSSL OFL10 OFL11 OWL PostgreSQL PHP202 PHP30 PHP301 PSFL RUBY ZLIB ZPL21 SVM-Light EULA ALASIR Microsoft-exFAT SIMIAN UDEVGAME unknown MTA COMMERCIAL teamspeak NO_LICENSES_DIALOGS=yes #### #### NO_IGNORE=yes DEFAULT_VERSIONS+=ssl=openssl apache=2.4 imagemagick=7 java=21 linux=c7 mysql=8.0 php=8.3 samba=4.19 varnish=7 WITH_SETID_MODE=force PHP_ZTS=enabled OPTIONS_UNSET+=OPENJPEG OPTIONS_UNSET+=GSSAPI_BASE OPTIONS_SET+=ZTS OPTIONS_SET+=GSSAPI_NONE ALLOW_UNSUPPORTED_SYSTEM=yes WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-PyNE-0.7.8_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.1.2.pkg [pkg-builder.dan.net.uk] Installing pkg-2.1.2... [pkg-builder.dan.net.uk] Extracting pkg-2.1.2: .......... done ===> py311-PyNE-0.7.8_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-PyNE-0.7.8_3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-PyNE-0.7.8_3 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-PyNE-0.7.8_3 for building => SHA256 Checksum OK for PyNE-0.7.8/decay.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/cram.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/decay-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/cram-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/prebuilt_nuc_data.h5. => SHA256 Checksum OK for PyNE-0.7.8/pyne-pyne-0.7.8_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by py311-PyNE-0.7.8_3 for building ===> Extracting for py311-PyNE-0.7.8_3 => SHA256 Checksum OK for PyNE-0.7.8/decay.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/cram.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/decay-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/cram-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.8/prebuilt_nuc_data.h5. => SHA256 Checksum OK for PyNE-0.7.8/pyne-pyne-0.7.8_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-PyNE-0.7.8_3 ===> Applying FreeBSD patches for py311-PyNE-0.7.8_3 from /usr/ports/science/py-PyNE/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-PyNE-0.7.8_3 depends on executable: cmake - not found ===> Installing existing package /packages/All/cmake-core-3.31.6.pkg [pkg-builder.dan.net.uk] Installing cmake-core-3.31.6... [pkg-builder.dan.net.uk] `-- Installing expat-2.7.1... [pkg-builder.dan.net.uk] `-- Extracting expat-2.7.1: .......... done [pkg-builder.dan.net.uk] `-- Installing jsoncpp-1.9.6_1... [pkg-builder.dan.net.uk] `-- Extracting jsoncpp-1.9.6_1: .......... done [pkg-builder.dan.net.uk] `-- Installing libidn2-2.3.8... [pkg-builder.dan.net.uk] | `-- Installing indexinfo-0.3.1_1... [pkg-builder.dan.net.uk] | `-- Extracting indexinfo-0.3.1_1: . done [pkg-builder.dan.net.uk] | `-- Installing libunistring-1.3... [pkg-builder.dan.net.uk] | `-- Extracting libunistring-1.3: .......... done [pkg-builder.dan.net.uk] `-- Extracting libidn2-2.3.8: .......... done [pkg-builder.dan.net.uk] `-- Installing libuv-1.51.0... [pkg-builder.dan.net.uk] `-- Extracting libuv-1.51.0: .......... done [pkg-builder.dan.net.uk] `-- Installing openssl-3.0.16,1... [pkg-builder.dan.net.uk] `-- Extracting openssl-3.0.16,1: .......... done [pkg-builder.dan.net.uk] `-- Installing rhash-1.4.4_1... [pkg-builder.dan.net.uk] | `-- Installing gettext-runtime-0.23.1... [pkg-builder.dan.net.uk] | `-- Extracting gettext-runtime-0.23.1: .......... done [pkg-builder.dan.net.uk] `-- Extracting rhash-1.4.4_1: .......... done [pkg-builder.dan.net.uk] Extracting cmake-core-3.31.6: .......... done ===> py311-PyNE-0.7.8_3 depends on executable: cmake - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-future>0 - not found ===> Installing existing package /packages/All/py311-future-0.18.3_1.pkg [pkg-builder.dan.net.uk] Installing py311-future-0.18.3_1... [pkg-builder.dan.net.uk] `-- Installing python311-3.11.12... [pkg-builder.dan.net.uk] | `-- Installing libffi-3.4.8... [pkg-builder.dan.net.uk] | `-- Extracting libffi-3.4.8: .......... done [pkg-builder.dan.net.uk] | `-- Installing mpdecimal-4.0.0... [pkg-builder.dan.net.uk] | `-- Extracting mpdecimal-4.0.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing readline-8.2.13_2... [pkg-builder.dan.net.uk] | `-- Extracting readline-8.2.13_2: .......... done [pkg-builder.dan.net.uk] `-- Extracting python311-3.11.12: .......... done [pkg-builder.dan.net.uk] Extracting py311-future-0.18.3_1: .......... done ===== Message from python311-3.11.12: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-PyNE-0.7.8_3 depends on package: py311-future>0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-matplotlib>0 - not found ===> Installing existing package /packages/All/py311-matplotlib-3.8.0_1.pkg [pkg-builder.dan.net.uk] Installing py311-matplotlib-3.8.0_1... [pkg-builder.dan.net.uk] `-- Installing fontconfig-2.15.0_3,1... [pkg-builder.dan.net.uk] | `-- Installing freetype2-2.13.3... 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[pkg-builder.dan.net.uk] `-- Extracting py311-packaging-24.2: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pillow-11.0.0... [pkg-builder.dan.net.uk] | `-- Installing jpeg-turbo-3.1.0... [pkg-builder.dan.net.uk] | `-- Extracting jpeg-turbo-3.1.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing lcms2-2.17... [pkg-builder.dan.net.uk] | | `-- Installing tiff-4.7.0... [pkg-builder.dan.net.uk] | | `-- Installing jbigkit-2.1_3... [pkg-builder.dan.net.uk] | | `-- Extracting jbigkit-2.1_3: .......... done [pkg-builder.dan.net.uk] | | `-- Installing lerc-4.0.0... [pkg-builder.dan.net.uk] | | `-- Extracting lerc-4.0.0: ..... done [pkg-builder.dan.net.uk] | | `-- Installing libdeflate-1.22... 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[pkg-builder.dan.net.uk] | | | `-- Extracting libinotify-20240724_1: .......... done [pkg-builder.dan.net.uk] | | | `-- Installing pcre2-10.45_1... [pkg-builder.dan.net.uk] | | | `-- Extracting pcre2-10.45_1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting glib-2.84.1_2,2: .......... done [pkg-builder.dan.net.uk] | | `-- Installing graphite2-1.3.14... [pkg-builder.dan.net.uk] | | `-- Extracting graphite2-1.3.14: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting harfbuzz-10.3.0: .......... done [pkg-builder.dan.net.uk] | `-- Extracting libraqm-0.10.2: .......... done [pkg-builder.dan.net.uk] | `-- Installing libxcb-1.17.0... [pkg-builder.dan.net.uk] | | `-- Installing libXau-1.0.11... [pkg-builder.dan.net.uk] | | `-- Extracting libXau-1.0.11: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXdmcp-1.1.5... [pkg-builder.dan.net.uk] | | `-- Installing xorgproto-2024.1... [pkg-builder.dan.net.uk] | | `-- Extracting xorgproto-2024.1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libXdmcp-1.1.5: ...... done [pkg-builder.dan.net.uk] | `-- Extracting libxcb-1.17.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing openjpeg-2.5.3... [pkg-builder.dan.net.uk] | `-- Extracting openjpeg-2.5.3: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-olefile-0.46_1... [pkg-builder.dan.net.uk] | `-- Extracting py311-olefile-0.46_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-tkinter-3.11.12_10... [pkg-builder.dan.net.uk] | | `-- Installing tcl86-8.6.16_2... [pkg-builder.dan.net.uk] | | `-- Extracting tcl86-8.6.16_2: .......... done [pkg-builder.dan.net.uk] | | `-- Installing tk86-8.6.16... [pkg-builder.dan.net.uk] | | `-- Installing libX11-1.8.12,1... [pkg-builder.dan.net.uk] | | `-- Extracting libX11-1.8.12,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXScrnSaver-1.2.4_1... [pkg-builder.dan.net.uk] | | | `-- Installing libXext-1.3.6,1... [pkg-builder.dan.net.uk] | | | `-- Extracting libXext-1.3.6,1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libXScrnSaver-1.2.4_1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXft-2.3.8... [pkg-builder.dan.net.uk] | | | `-- Installing libXrender-0.9.12... [pkg-builder.dan.net.uk] | | | `-- Extracting libXrender-0.9.12: ....... done [pkg-builder.dan.net.uk] | | `-- Extracting libXft-2.3.8: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting tk86-8.6.16: .......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-tkinter-3.11.12_10: ...... done [pkg-builder.dan.net.uk] | `-- Installing webp-1.5.0... [pkg-builder.dan.net.uk] | | `-- Installing freeglut-3.2.1... [pkg-builder.dan.net.uk] | | `-- Installing libGLU-9.0.3... [pkg-builder.dan.net.uk] | | | `-- Installing libglvnd-1.7.0... [pkg-builder.dan.net.uk] | | | `-- Extracting libglvnd-1.7.0: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libGLU-9.0.3: ..... done [pkg-builder.dan.net.uk] | | `-- Installing libICE-1.1.1,1... [pkg-builder.dan.net.uk] | | `-- Extracting libICE-1.1.1,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXi-1.8.1,1... [pkg-builder.dan.net.uk] | | | `-- Installing libXfixes-6.0.1... [pkg-builder.dan.net.uk] | | | `-- Extracting libXfixes-6.0.1: ....... done [pkg-builder.dan.net.uk] | | `-- Extracting libXi-1.8.1,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXrandr-1.5.4... [pkg-builder.dan.net.uk] | | `-- Extracting libXrandr-1.5.4: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libXxf86vm-1.1.5... [pkg-builder.dan.net.uk] | | `-- Extracting libXxf86vm-1.1.5: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting freeglut-3.2.1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing giflib-5.2.2... [pkg-builder.dan.net.uk] | | `-- Extracting giflib-5.2.2: .......... done [pkg-builder.dan.net.uk] | `-- Extracting webp-1.5.0: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-pillow-11.0.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pluggy-1.5.0... [pkg-builder.dan.net.uk] `-- Extracting py311-pluggy-1.5.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pyparsing-3.2.3... [pkg-builder.dan.net.uk] `-- Extracting py311-pyparsing-3.2.3: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-python-dateutil-2.9.0... [pkg-builder.dan.net.uk] `-- Extracting py311-python-dateutil-2.9.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-tornado-6.4... [pkg-builder.dan.net.uk] `-- Extracting py311-tornado-6.4: .......... done [pkg-builder.dan.net.uk] `-- Installing qhull-8.0.2_3,1... [pkg-builder.dan.net.uk] `-- Extracting qhull-8.0.2_3,1: .......... done [pkg-builder.dan.net.uk] Extracting py311-matplotlib-3.8.0_1: .......... done ==> Running trigger: fontconfig.ucl Running fc-cache to build fontconfig cache... ==> Running trigger: gio-modules.ucl Generating GIO modules cache ==> Running trigger: glib-schemas.ucl Compiling glib schemas No schema files found: doing nothing. ===== Message from freetype2-2.13.3: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed). ===== Message from gcc13-13.3.0_2: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from libimagequant-4.3.4_2: -- ===> NOTICE: The libimagequant port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from libinotify-20240724_1: -- You might want to consider increasing the kern.maxfiles tunable if you plan to use this library for applications that need to monitor activity of a lot of files. ===== Message from freeglut-3.2.1: -- Joystick support is untested and it is unknown if it works. Do not hesitate to contact x11@FreeBSD.org if this causes issues. ===> py311-PyNE-0.7.8_3 depends on package: py311-matplotlib>0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-progress>0 - not found ===> Installing existing package /packages/All/py311-progress-1.6_1.pkg [pkg-builder.dan.net.uk] Installing py311-progress-1.6_1... [pkg-builder.dan.net.uk] Extracting py311-progress-1.6_1: .......... done ===> py311-PyNE-0.7.8_3 depends on package: py311-progress>0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-tables>0 - not found ===> Installing existing package /packages/All/py311-tables-3.10.2_1.pkg [pkg-builder.dan.net.uk] Installing py311-tables-3.10.2_1... [pkg-builder.dan.net.uk] `-- Installing c-blosc2-2.17.1... [pkg-builder.dan.net.uk] `-- Extracting c-blosc2-2.17.1: .......... done [pkg-builder.dan.net.uk] `-- Installing hdf5-1.12.2_2,1... [pkg-builder.dan.net.uk] `-- Extracting hdf5-1.12.2_2,1: .......... done [pkg-builder.dan.net.uk] `-- Installing lzo2-2.10_1... [pkg-builder.dan.net.uk] `-- Extracting lzo2-2.10_1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-mock-5.2.0_1... [pkg-builder.dan.net.uk] `-- Extracting py311-mock-5.2.0_1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-numexpr-2.10.2... [pkg-builder.dan.net.uk] `-- Extracting py311-numexpr-2.10.2: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-py-cpuinfo-9.0.0_1... [pkg-builder.dan.net.uk] | `-- Installing lscpu-1.3.0... [pkg-builder.dan.net.uk] | `-- Extracting lscpu-1.3.0: .. done [pkg-builder.dan.net.uk] `-- Extracting py311-py-cpuinfo-9.0.0_1: .......... done [pkg-builder.dan.net.uk] `-- Installing ucl-1.03_5... [pkg-builder.dan.net.uk] `-- Extracting ucl-1.03_5: .......... done [pkg-builder.dan.net.uk] Extracting py311-tables-3.10.2_1: .......... done ===> py311-PyNE-0.7.8_3 depends on package: py311-tables>0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-scipy>0 - not found ===> Installing existing package /packages/All/py311-scipy-1.11.1_4,1.pkg [pkg-builder.dan.net.uk] Installing py311-scipy-1.11.1_4,1... [pkg-builder.dan.net.uk] `-- Installing blas-3.12.1... [pkg-builder.dan.net.uk] `-- Extracting blas-3.12.1: ..... done [pkg-builder.dan.net.uk] Extracting py311-scipy-1.11.1_4,1: .......... done ===> py311-PyNE-0.7.8_3 depends on package: py311-scipy>0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-tables>0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-pyyaml>=0 - not found ===> Installing existing package /packages/All/py311-pyyaml-6.0.1_1.pkg [pkg-builder.dan.net.uk] Installing py311-pyyaml-6.0.1_1... [pkg-builder.dan.net.uk] `-- Installing libyaml-0.2.5... [pkg-builder.dan.net.uk] `-- Extracting libyaml-0.2.5: ...... done [pkg-builder.dan.net.uk] Extracting py311-pyyaml-6.0.1_1: .......... done ===> py311-PyNE-0.7.8_3 depends on package: py311-pyyaml>=0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-OpenMC>0 - not found ===> Installing existing package /packages/All/py311-OpenMC-0.15.0_1.pkg [pkg-builder.dan.net.uk] Installing py311-OpenMC-0.15.0_1... [pkg-builder.dan.net.uk] `-- Installing openmc-0.15.0... [pkg-builder.dan.net.uk] | `-- Installing libfmt-10.2.1... [pkg-builder.dan.net.uk] | `-- Extracting libfmt-10.2.1: .......... done [pkg-builder.dan.net.uk] | `-- Installing mpich-4.3.0... [pkg-builder.dan.net.uk] | | `-- Installing hwloc2-2.11.2... [pkg-builder.dan.net.uk] | | `-- Installing level-zero-1.21.9... [pkg-builder.dan.net.uk] | | | `-- Installing spdlog-1.15.2... [pkg-builder.dan.net.uk] | | | `-- Extracting spdlog-1.15.2: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting level-zero-1.21.9: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libpciaccess-0.18.1_1... [pkg-builder.dan.net.uk] | | | `-- Installing hwdata-0.394,1... [pkg-builder.dan.net.uk] | | | `-- Extracting hwdata-0.394,1: ...... done [pkg-builder.dan.net.uk] | | `-- Extracting libpciaccess-0.18.1_1: ..... done [pkg-builder.dan.net.uk] | | `-- Extracting hwloc2-2.11.2: .......... done [pkg-builder.dan.net.uk] | | `-- Installing json-c-0.18... [pkg-builder.dan.net.uk] | | `-- Extracting json-c-0.18: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libepoll-shim-0.0.20240608... [pkg-builder.dan.net.uk] | | `-- Extracting libepoll-shim-0.0.20240608: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libfabric-1.15.1_4... [pkg-builder.dan.net.uk] | | `-- Extracting libfabric-1.15.1_4: .......... done [pkg-builder.dan.net.uk] | | `-- Installing perl5-5.36.3_3... [pkg-builder.dan.net.uk] | | `-- Extracting perl5-5.36.3_3: .......... done [pkg-builder.dan.net.uk] | `-- Extracting mpich-4.3.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing pugixml-1.15... [pkg-builder.dan.net.uk] | `-- Extracting pugixml-1.15: .......... done [pkg-builder.dan.net.uk] `-- Extracting openmc-0.15.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-h5py-3.13.0... [pkg-builder.dan.net.uk] `-- Extracting py311-h5py-3.13.0: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-ipython-8.18.1_1... [pkg-builder.dan.net.uk] | `-- Installing py311-decorator-5.2.1... [pkg-builder.dan.net.uk] | `-- Extracting py311-decorator-5.2.1: ......... done [pkg-builder.dan.net.uk] | `-- Installing py311-jedi-0.19.1_1... [pkg-builder.dan.net.uk] | | `-- Installing py311-parso-0.8.4_1... [pkg-builder.dan.net.uk] | | `-- Extracting py311-parso-0.8.4_1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-jedi-0.19.1_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-matplotlib-inline-0.1.6_1... [pkg-builder.dan.net.uk] | | `-- Installing py311-traitlets-5.14.3... [pkg-builder.dan.net.uk] | | `-- Extracting py311-traitlets-5.14.3: .......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-matplotlib-inline-0.1.6_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-pexpect-4.9.0_1... [pkg-builder.dan.net.uk] | | `-- Installing py311-ptyprocess-0.7.0_1... [pkg-builder.dan.net.uk] | | `-- Extracting py311-ptyprocess-0.7.0_1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-pexpect-4.9.0_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-prompt-toolkit-3.0.51... [pkg-builder.dan.net.uk] | | `-- Installing py311-wcwidth-0.2.8_1... [pkg-builder.dan.net.uk] | | `-- Extracting py311-wcwidth-0.2.8_1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-prompt-toolkit-3.0.51: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-pygments-2.19.1... [pkg-builder.dan.net.uk] | `-- Extracting py311-pygments-2.19.1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-sqlite3-3.11.12_10... [pkg-builder.dan.net.uk] | | `-- Installing sqlite3-3.46.1_1,1... [pkg-builder.dan.net.uk] | | `-- Installing libedit-3.1.20250104,1... [pkg-builder.dan.net.uk] | | `-- Extracting libedit-3.1.20250104,1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting sqlite3-3.46.1_1,1: ......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-sqlite3-3.11.12_10: ...... done [pkg-builder.dan.net.uk] | `-- Installing py311-stack-data-0.6.3_1... [pkg-builder.dan.net.uk] | | `-- Installing py311-asttokens-2.4.1_1... [pkg-builder.dan.net.uk] | | `-- Extracting py311-asttokens-2.4.1_1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing py311-executing-2.2.0... [pkg-builder.dan.net.uk] | | `-- Extracting py311-executing-2.2.0: .......... done [pkg-builder.dan.net.uk] | | `-- Installing py311-pure-eval-0.2.3... [pkg-builder.dan.net.uk] | | `-- Extracting py311-pure-eval-0.2.3: .......... done [pkg-builder.dan.net.uk] | `-- Extracting py311-stack-data-0.6.3_1: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-ipython-8.18.1_1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-pandas-2.2.3,1... [pkg-builder.dan.net.uk] | `-- Installing py311-bottleneck-1.3.8_1... [pkg-builder.dan.net.uk] | `-- Extracting py311-bottleneck-1.3.8_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing py311-tzdata-2025.2... [pkg-builder.dan.net.uk] | `-- Extracting py311-tzdata-2025.2: .......... done [pkg-builder.dan.net.uk] `-- Extracting py311-pandas-2.2.3,1: .......... done [pkg-builder.dan.net.uk] `-- Installing py311-uncertainties-3.2.2... [pkg-builder.dan.net.uk] `-- Extracting py311-uncertainties-3.2.2: .......... done [pkg-builder.dan.net.uk] Extracting py311-OpenMC-0.15.0_1: .......... done ===== Message from py311-pandas-2.2.3,1: -- Install math/py-statsmodels to enable parts of pandas.stats. Install devel/py-xarray to enable the to_xarray() function. ===> py311-PyNE-0.7.8_3 depends on package: py311-OpenMC>0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on executable: gfortran13 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-cython>=0.29.37<3 - not found ===> Installing existing package /packages/All/py311-cython-0.29.37_2.pkg [pkg-builder.dan.net.uk] Installing py311-cython-0.29.37_2... [pkg-builder.dan.net.uk] Extracting py311-cython-0.29.37_2: .......... done ===> py311-PyNE-0.7.8_3 depends on package: py311-cython>=0.29.37<3 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on package: py311-setuptools>=63.1.0 - not found ===> Installing existing package /packages/All/py311-setuptools-63.1.0_3.pkg [pkg-builder.dan.net.uk] Installing py311-setuptools-63.1.0_3... [pkg-builder.dan.net.uk] Extracting py311-setuptools-63.1.0_3: .......... done ===> py311-PyNE-0.7.8_3 depends on package: py311-setuptools>=63.1.0 - found ===> Returning to build of py311-PyNE-0.7.8_3 ===> py311-PyNE-0.7.8_3 depends on file: /usr/local/bin/python3.11 - found ===> py311-PyNE-0.7.8_3 depends on file: /usr/local/bin/as - found ===> py311-PyNE-0.7.8_3 depends on file: /usr/local/bin/ccache - not found ===> Installing existing package /packages/All/ccache-3.7.12_8.pkg [pkg-builder.dan.net.uk] Installing ccache-3.7.12_8... [pkg-builder.dan.net.uk] Extracting ccache-3.7.12_8: ......... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc13 create symlink for gcc13 (world) create symlink for g++13 create symlink for g++13 (world) create symlink for cpp13 create symlink for cpp13 (world) create symlink for clang create symlink for clang (world) create symlink for clang++ create symlink for clang++ (world) ===== Message from ccache-3.7.12_8: -- NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> py311-PyNE-0.7.8_3 depends on file: /usr/local/bin/ccache - found ===> Returning to build of py311-PyNE-0.7.8_3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-PyNE-0.7.8_3 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) ===> py311-PyNE-0.7.8_3 depends on shared library: libMOAB.so - not found ===> Installing existing package /packages/All/moab-5.5.1_2.pkg [pkg-builder.dan.net.uk] Installing moab-5.5.1_2... [pkg-builder.dan.net.uk] `-- Installing netcdf-4.9.3... [pkg-builder.dan.net.uk] | `-- Installing curl-8.13.0_1... [pkg-builder.dan.net.uk] | | `-- Installing brotli-1.1.0,1... [pkg-builder.dan.net.uk] | | `-- Extracting brotli-1.1.0,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libnghttp2-1.65.0... [pkg-builder.dan.net.uk] | | `-- Extracting libnghttp2-1.65.0: ....... done [pkg-builder.dan.net.uk] | | `-- Installing libssh2-1.11.1,3... [pkg-builder.dan.net.uk] | | `-- Extracting libssh2-1.11.1,3: .......... done [pkg-builder.dan.net.uk] | `-- Extracting curl-8.13.0_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing libaec-1.1.3... [pkg-builder.dan.net.uk] | `-- Extracting libaec-1.1.3: .......... done [pkg-builder.dan.net.uk] | `-- Installing pkgconf-2.3.0_1,1... [pkg-builder.dan.net.uk] | `-- Extracting pkgconf-2.3.0_1,1: .......... done [pkg-builder.dan.net.uk] `-- Extracting netcdf-4.9.3: .......... done [pkg-builder.dan.net.uk] `-- Installing openmpi4-4.1.8... [pkg-builder.dan.net.uk] | `-- Installing libevent-2.1.12... [pkg-builder.dan.net.uk] | `-- Extracting libevent-2.1.12: .......... done [pkg-builder.dan.net.uk] | `-- Installing libltdl-2.5.4... [pkg-builder.dan.net.uk] | `-- Extracting libltdl-2.5.4: ......... done [pkg-builder.dan.net.uk] | `-- Installing munge-0.5.16... [pkg-builder.dan.net.uk] | `-- Extracting munge-0.5.16: ......... done [pkg-builder.dan.net.uk] | `-- Installing slurm-wlm-23.11.7_4... [pkg-builder.dan.net.uk] | | `-- Installing check-0.15.2_1... [pkg-builder.dan.net.uk] | | `-- Extracting check-0.15.2_1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing dbus-1.16.2_2,1... [pkg-builder.dan.net.uk] | | `-- Installing libSM-1.2.6,1... [pkg-builder.dan.net.uk] | | `-- Extracting libSM-1.2.6,1: ........ done ===> Creating groups Creating group 'messagebus' with gid '556' ===> Creating users Creating user 'messagebus' with uid '556' [pkg-builder.dan.net.uk] | | `-- Extracting dbus-1.16.2_2,1: ......... done [pkg-builder.dan.net.uk] | | `-- Installing http-parser-2.9.4... [pkg-builder.dan.net.uk] | | `-- Extracting http-parser-2.9.4: .... done [pkg-builder.dan.net.uk] | | `-- Installing libjwt-2.1.2... [pkg-builder.dan.net.uk] | | `-- Installing jansson-2.14.1... [pkg-builder.dan.net.uk] | | `-- Extracting jansson-2.14.1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libjwt-2.1.2: ........ done [pkg-builder.dan.net.uk] | | `-- Installing librdkafka-2.8.0... [pkg-builder.dan.net.uk] | | `-- Extracting librdkafka-2.8.0: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libsysinfo-0.0.3_3... [pkg-builder.dan.net.uk] | | `-- Extracting libsysinfo-0.0.3_3: ...... done [pkg-builder.dan.net.uk] | | `-- Installing libunwind-20240221_2... [pkg-builder.dan.net.uk] | | `-- Extracting libunwind-20240221_2: .......... done [pkg-builder.dan.net.uk] | | `-- Installing lua54-5.4.7... [pkg-builder.dan.net.uk] | | `-- Extracting lua54-5.4.7: .......... done [pkg-builder.dan.net.uk] | | `-- Installing mysql80-client-8.0.42... [pkg-builder.dan.net.uk] | | `-- Installing cyrus-sasl-2.1.28_5... *** Added group `cyrus' (id 60) *** Added user `cyrus' (id 60) [pkg-builder.dan.net.uk] | | `-- Extracting cyrus-sasl-2.1.28_5: .......... done [pkg-builder.dan.net.uk] | | `-- Installing groff-1.23.0_4... [pkg-builder.dan.net.uk] | | | `-- Installing psutils-1.17_6... [pkg-builder.dan.net.uk] | | | `-- Installing libpaper-1.1.28_1... [pkg-builder.dan.net.uk] | | | `-- Extracting libpaper-1.1.28_1: .......... done [pkg-builder.dan.net.uk] | | | `-- Extracting psutils-1.17_6: .......... done [pkg-builder.dan.net.uk] | | | `-- Installing uchardet-0.0.8_1... [pkg-builder.dan.net.uk] | | | `-- Extracting uchardet-0.0.8_1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting groff-1.23.0_4: .......... done [pkg-builder.dan.net.uk] | | `-- Installing hidapi-0.14.0... [pkg-builder.dan.net.uk] | | `-- Extracting hidapi-0.14.0: .......... done [pkg-builder.dan.net.uk] | | `-- Installing icu-76.1,1... [pkg-builder.dan.net.uk] | | `-- Extracting icu-76.1,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libfido2-1.15.0... [pkg-builder.dan.net.uk] | | | `-- Installing libcbor-0.12.0... [pkg-builder.dan.net.uk] | | | `-- Installing libcjson-1.7.18_2... [pkg-builder.dan.net.uk] | | | `-- Extracting libcjson-1.7.18_2: .......... done [pkg-builder.dan.net.uk] | | | `-- Extracting libcbor-0.12.0: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libfido2-1.15.0: .......... done [pkg-builder.dan.net.uk] | | `-- Installing openldap26-client-2.6.9_1... [pkg-builder.dan.net.uk] | | `-- Extracting openldap26-client-2.6.9_1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting mysql80-client-8.0.42: .......... done [pkg-builder.dan.net.uk] | | `-- Installing onetbb-2022.1.0... [pkg-builder.dan.net.uk] | | `-- Extracting onetbb-2022.1.0: .......... done ===> Creating groups Creating group 'slurm' with gid '468' ===> Creating users Creating user 'slurm' with uid '468' [pkg-builder.dan.net.uk] | `-- Extracting slurm-wlm-23.11.7_4: .......... done [pkg-builder.dan.net.uk] `-- Extracting openmpi4-4.1.8: .......... done [pkg-builder.dan.net.uk] Extracting moab-5.5.1_2: .......... done ===== Message from cyrus-sasl-2.1.28_5: -- You can use sasldb2 for authentication, to add users use: saslpasswd2 -c username If you want to enable SMTP AUTH with the system Sendmail, read Sendmail.README NOTE: This port has been compiled with a default pwcheck_method of auxprop. If you want to authenticate your user by /etc/passwd, PAM or LDAP, install ports/security/cyrus-sasl2-saslauthd and set sasl_pwcheck_method to saslauthd after installing the Cyrus-IMAPd 2.X port. You should also check the /usr/local/lib/sasl2/*.conf files for the correct pwcheck_method. If you want to use GSSAPI mechanism, install ports/security/cyrus-sasl2-gssapi. If you want to use SRP mechanism, install ports/security/cyrus-sasl2-srp. If you want to use LDAP auxprop plugin, install ports/security/cyrus-sasl2-ldapdb. ===== Message from groff-1.23.0_4: -- In order to be able to use the html driver, you need to install the following packages: - ghostscript - netpbm -- ===> NOTICE: The groff port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from openldap26-client-2.6.9_1: -- The OpenLDAP client package has been successfully installed. Edit /usr/local/etc/openldap/ldap.conf to change the system-wide client defaults. Try `man ldap.conf' and visit the OpenLDAP FAQ-O-Matic at http://www.OpenLDAP.org/faq/index.cgi?file=3 for more information. ===== Message from mysql80-client-8.0.42: -- This is the mysql CLIENT without the server. for complete server and client, please install databases/mysql80-server ===== Message from slurm-wlm-23.11.7_4: -- ===> NOTICE: The slurm-wlm port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from openmpi4-4.1.8: -- ===> NOTICE: The openmpi4 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> py311-PyNE-0.7.8_3 depends on shared library: libMOAB.so - found (/usr/local/lib/libMOAB.so) ===> Returning to build of py311-PyNE-0.7.8_3 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-PyNE-0.7.8_3 setup.py:38: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses import imp /usr/local/bin/cmake CMake Deprecation Warning at CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The C compiler identification is Clang 18.1.6 -- The CXX compiler identification is Clang 18.1.6 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/libexec/ccache/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/libexec/ccache/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success / \ ) (( )) ( (@) /|\ ))_(( /|\ |-| / | \ (/\|/\) / | \ (@) | | -------------------/--|-voV---\`|'/--Vov-|--\---------------------|-| |-| '^` (o o) '^` | | | | `\Y/' |-| |-| | | | | /\ ___ __ __ /\ |-| |-| /^~\ / _ \_ _ /\ \ \/__\ /^~\ | | | | /^~\ / /_)/ | | |/ \/ /_\ /^~\ |-| |-| /^~\ / ___/| |_| / /\ //__ /^~\ | | | | ^||` \/ \__, \_\ \/\__/ ^||` |-| |-| || |____/ || | | | | ==== ==== |-| |-| | | | | |-| |-|___________________________________________________________________| | (@) l /\ / ( ( \ /\ l `\|-| l / V \ \ V \ l (@) l/ _) )_ \I `\ /' ` -- Pyne platform defined as: __LINUX__ -- Checking whether to build spatial solvers -- -- Checking CMAKE_CXX_COMPILER_ID: Clang -- Build spatial solvers: false -- Build type: Release -- PyNE Fast Compile: FALSE -- CMAKE_INSTALL_RPATH: /usr/local/lib:/usr/local/libexec/lib -- The ASM compiler identification is Clang with GNU-like command-line -- Found assembler: /usr/local/libexec/ccache/cc -- CMake Install Prefix: /usr/local -- Dependency Root Dir (DEPS_ROOT_DIR): /usr/local/libexec -- Dependency Hints (DEPS_HINTS): HINTS;/usr/local/libexec -- Dependency Binary Hints (DEPS_BIN_HINTS): HINTS;/usr/local/libexec;/usr/local/libexec/bin -- Dependency Library Hints (DEPS_LIB_HINTS): HINTS;/usr/local/libexec;/usr/local/libexec/lib -- Dependency Include Hints (DEPS_INCLUDE_HINTS): HINTS;/usr/local/libexec/include -- HDF5 Root: /usr/local -- Found HDF5: /usr/local/lib/libhdf5.so;/usr/local/lib/libhdf5_hl.so;hdf5-shared (found version "1.12.2") -- HDF5 Include directory: /usr/local/include -- HDF5 Library directories: /usr/local/lib -- HDF5 Libraries: hdf5-shared -- HDF5 library version: 1.12.2 -- MOAB Root: /usr/local -- Could NOT find MOAB (missing: MOAB_INCLUDE_DIRS) -- MOAB Found: FALSE CMake Warning (dev) at CMakeLists.txt:139 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/local/bin/python3.11 (found version "3.11.12") CMake Warning (dev) at CMakeLists.txt:140 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonLibs: /usr/local/lib/libpython3.11.so (found version "3.11.12") -- PYTHON_EXECUTABLE: /usr/local/bin/python3.11 -- PYTHON_SITE_PACKAGES: /usr/local/lib/python3.11/site-packages CMake Warning (dev) at cmake/FindNumpy.cmake:28 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:157 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- NUMPY_VERSION_STRING = 1.26.4 -- Found Numpy: 1.26.4 -- The Fortran compiler identification is GNU 13.3.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/bin/gfortran13 - skipped -- CMAKE_Fortran_IMPLICIT_LINK_DIRECTORIES: /usr/local/lib/gcc13;/usr/local/lib/gcc13/gcc/x86_64-portbld-freebsd14.2/13.3.0;/usr/local/x86_64-portbld-freebsd14.2/lib -- CMAKE_Fortran_IMPLICIT_LINK_LIBRARIES: gfortran;m;ssp_nonshared;gcc;gcc_s;quadmath;m;c;gcc;gcc_s CMake Warning (dev) at cmake/FindCython.cmake:31 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake/UseCython.cmake:74 (find_package) CMakeLists.txt:178 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Cython: /usr/local/bin/cython CMake Warning (dev) at cmake/UseCython.cmake:75 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:178 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- LIBS: hdf5-shared;/usr/local/lib/libpython3.11.so -- Extracting decay.tar.gz x decay.h x decay.cpp -- Extracting decay-linux-clang.tar.gz x decay-linux-clang.s -- Extracting cram.tar.gz x cram.c x cram.h -- Extracting cram-linux-clang.tar.gz x cram-linux-clang.s -- Not fast compiling decay.cpp since PyNE fast compile is disabled. -- Not fast compiling cram.c since PyNE fast compile is disabled. -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Modules to Cythonize: ace;bins;data;dtypes;endf;enrichment;extra_types;jsoncpp;material;material_library;nucname;particle;pyne_config;rxname;source;stlcontainers;tally;transmuters;_utils -- F2PY F90 FLAGS: -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne/xs: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Configuring done (2.8s) -- Generating done (0.0s) -- Build files have been written to: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build [ 0%] Built target ReplicatePythonSourceTree [ 1%] Building C object src/CMakeFiles/pyne.dir/cram.c.o [ 2%] Building CXX object src/CMakeFiles/pyne.dir/decay.cpp.o [ 3%] Building CXX object src/CMakeFiles/pyne.dir/atomic_data.cpp.o [ 4%] Building CXX object src/CMakeFiles/pyne.dir/data.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/data.cpp:3: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/data.h:24: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 2 warnings generated. [ 6%] Building CXX object src/CMakeFiles/pyne.dir/enrichment.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment.cpp:3: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment.h:10: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_symbolic.h:20: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_cascade.h:9: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/data.h:24: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 2 warnings generated. [ 7%] Building CXX object src/CMakeFiles/pyne.dir/enrichment_cascade.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_cascade.cpp:3: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_cascade.h:9: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/data.h:24: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 2 warnings generated. [ 8%] Building CXX object src/CMakeFiles/pyne.dir/enrichment_symbolic.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_symbolic.cpp:1: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_symbolic40.cpp:8: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_symbolic.h:20: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/enrichment_cascade.h:9: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/data.h:24: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 2 warnings generated. [ 9%] Building CXX object src/CMakeFiles/pyne.dir/jsoncpp.cpp.o /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/jsoncpp.cpp:2123:74: warning: implicit conversion from 'const Int64' (aka 'const long long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 2123 | JSON_ASSERT_MESSAGE( value_.real_ >= minInt64 && value_.real_ <= maxInt64, "Real out of Int64 range" ); | ~~ ^~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/jsoncpp.cpp:1429:58: note: expanded from macro 'JSON_ASSERT_MESSAGE' 1429 | #define JSON_ASSERT_MESSAGE( condition, message ) if (!( condition )) JSON_FAIL_MESSAGE( message ) | ^~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/jsoncpp.cpp:2149:67: warning: implicit conversion from 'const UInt64' (aka 'const unsigned long long') to 'double' changes value from 18446744073709551615 to 18446744073709551616 [-Wimplicit-const-int-float-conversion] 2149 | JSON_ASSERT_MESSAGE( value_.real_ >= 0 && value_.real_ <= maxUInt64, "Real out of UInt64 range" ); | ~~ ^~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/jsoncpp.cpp:1429:58: note: expanded from macro 'JSON_ASSERT_MESSAGE' 1429 | #define JSON_ASSERT_MESSAGE( condition, message ) if (!( condition )) JSON_FAIL_MESSAGE( message ) | ^~~~~~~~~ 2 warnings generated. [ 10%] Building CXX object src/CMakeFiles/pyne.dir/jsoncustomwriter.cpp.o [ 12%] Building CXX object src/CMakeFiles/pyne.dir/material.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/material.cpp:13: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/material.h:28: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 2 warnings generated. [ 13%] Building CXX object src/CMakeFiles/pyne.dir/material_library.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/material_library.cpp:8: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/material_library.h:16: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/material.h:28: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 2 warnings generated. [ 14%] Building CXX object src/CMakeFiles/pyne.dir/nucname.cpp.o [ 15%] Building CXX object src/CMakeFiles/pyne.dir/particle.cpp.o [ 16%] Building CXX object src/CMakeFiles/pyne.dir/source.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/source.cpp:10: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/source.h:18: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/source.cpp:10: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/source.h:35:32: warning: non-void function does not return a value [-Wreturn-type] 35 | virtual std::string fluka() {} | ^ 3 warnings generated. [ 18%] Building CXX object src/CMakeFiles/pyne.dir/rxname.cpp.o [ 19%] Building CXX object src/CMakeFiles/pyne.dir/tally.cpp.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/tally.cpp:11: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/tally.h:18: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 2 warnings generated. [ 20%] Building CXX object src/CMakeFiles/pyne.dir/transmuters.cpp.o [ 21%] Building CXX object src/CMakeFiles/pyne.dir/utils.cpp.o [ 22%] Building Fortran object src/CMakeFiles/pyne.dir/endftod.f90.o [ 24%] Linking CXX shared library libpyne.so [ 24%] Built target pyne [ 25%] Compiling Cython CXX source for ace... [ 26%] Building CXX object pyne/CMakeFiles/ace.dir/ace.cxx.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/ace.cxx:766: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ 1 warning generated. [ 27%] Linking CXX shared module ace.so [ 27%] Built target ace [ 28%] Compiling Cython CXX source for bins... 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[ 33%] Building CXX object pyne/CMakeFiles/data.dir/data.cxx.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/data.cxx:790: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/data.cxx:798: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/data.h:24: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ 3 warnings generated. 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[ 84%] Building CXX object pyne/CMakeFiles/tally.dir/tally.cxx.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/tally.cxx:785: In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/tally.h:18: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 264 | T mem_arr [arr_dims[0] * arr_dims[1]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:264:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:254:13: note: declared here 254 | hsize_t arr_dims [2]; | ^ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension] 300 | T mem_arr [arr_dims[0] * arr_dims[1] * arr_dims[2]]; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:300:16: note: read of non-constexpr variable 'arr_dims' is not allowed in a constant expression /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src/h5wrap.h:290:13: note: declared here 290 | hsize_t arr_dims [3]; | ^ In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/tally.cxx:788: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ 3 warnings generated. [ 85%] Linking CXX shared module tally.so [ 85%] Built target tally [ 86%] Compiling Cython CXX source for transmuters... [ 87%] Building CXX object pyne/CMakeFiles/transmuters.dir/transmuters.cxx.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/transmuters.cxx:788: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ 1 warning generated. [ 89%] Linking CXX shared module transmuters.so [ 89%] Built target transmuters [ 90%] Compiling Cython CXX source for _utils... [ 91%] Building CXX object pyne/CMakeFiles/_utils.dir/_utils.cxx.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/_utils.cxx:767: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ 1 warning generated. [ 92%] Linking CXX shared module _utils.so [ 92%] Built target _utils [ 93%] Compiling Cython C source for cram... warning: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne/cram.pyx:17:6: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables warning: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne/cram.pyx:21:6: cpdef variables will not be supported in Cython 3; currently they are no different from cdef variables [ 95%] Building C object pyne/CMakeFiles/cram.dir/cram.c.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/cram.c:752: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ 1 warning generated. [ 96%] Linking C shared module cram.so [ 96%] Built target cram [ 97%] Compiling Cython CXX source for models... [ 98%] Building CXX object pyne/xs/CMakeFiles/models.dir/models.cxx.o In file included from /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne/xs/models.cxx:766: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/arrayobject.h:5: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarrayobject.h:12: In file included from /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929: /usr/local/lib/python3.11/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^ 1 warning generated. [100%] Linking CXX shared module models.so [100%] Built target models NOTE: If you have not done so already, please be sure that your PATH has been appropriately set to the install prefix of pyne. For this install of pyne you may add the following lines to your '~/.bashrc' file or equivalent: # PyNE Environment Settings export PATH="/usr/local/bin:${PATH}" Writing atomic_data.h Writing atomic_data.cpp CMake command is cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local -DHDF5_ROOT=/usr/local -DHDF5_LIBRARIES=/usr/local/lib/libhdf5.so;/usr/local/lib/libhdf5_hl.so -DHDF5_LIBRARY_DIRS=/usr/local/lib -DHDF5_INCLUDE_DIRS=/usr/local/include -DWITH_MOAB=ON -DMOAB_ROOT=/usr/local -DPYNE_FAST_COMPILE=FALSE -DENABLE_SPATIAL_SOLVERS=ON -DPYTHON_EXECUTABLE=/usr/local/bin/python3.11 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-PyNE-0.7.8_3 setup.py:38: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses import imp /usr/local/bin/cmake CMake Deprecation Warning at CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. / \ ) (( )) ( (@) /|\ ))_(( /|\ |-| / | \ (/\|/\) / | \ (@) | | -------------------/--|-voV---\`|'/--Vov-|--\---------------------|-| |-| '^` (o o) '^` | | | | `\Y/' |-| |-| | | | | /\ ___ __ __ /\ |-| |-| /^~\ / _ \_ _ /\ \ \/__\ /^~\ | | | | /^~\ / /_)/ | | |/ \/ /_\ /^~\ |-| |-| /^~\ / ___/| |_| / /\ //__ /^~\ | | | | ^||` \/ \__, \_\ \/\__/ ^||` |-| |-| || |____/ || | | | | ==== ==== |-| |-| | | | | |-| |-|___________________________________________________________________| | (@) l /\ / ( ( \ /\ l `\|-| l / V \ \ V \ l (@) l/ _) )_ \I `\ /' ` -- Pyne platform defined as: __LINUX__ -- Checking whether to build spatial solvers -- -- Checking CMAKE_CXX_COMPILER_ID: Clang -- Build spatial solvers: false -- Build type: Release -- PyNE Fast Compile: FALSE -- CMAKE_INSTALL_RPATH: /usr/local/lib:/usr/local/libexec/lib -- CMake Install Prefix: /usr/local -- Dependency Root Dir (DEPS_ROOT_DIR): /usr/local/libexec -- Dependency Hints (DEPS_HINTS): HINTS;/usr/local/libexec -- Dependency Binary Hints (DEPS_BIN_HINTS): HINTS;/usr/local/libexec;/usr/local/libexec/bin -- Dependency Library Hints (DEPS_LIB_HINTS): HINTS;/usr/local/libexec;/usr/local/libexec/lib -- Dependency Include Hints (DEPS_INCLUDE_HINTS): HINTS;/usr/local/libexec/include -- HDF5 Root: /usr/local -- HDF5 Include directory: /usr/local/include -- HDF5 Library directories: /usr/local/lib -- HDF5 Libraries: hdf5-shared -- HDF5 library version: 1.12.2 -- MOAB Root: /usr/local -- Could NOT find MOAB (missing: MOAB_INCLUDE_DIRS) -- MOAB Found: FALSE CMake Warning (dev) at CMakeLists.txt:139 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:140 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- PYTHON_EXECUTABLE: /usr/local/bin/python3.11 -- PYTHON_SITE_PACKAGES: /usr/local/lib/python3.11/site-packages CMake Warning (dev) at cmake/FindNumpy.cmake:28 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:157 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- NUMPY_VERSION_STRING = 1.26.4 -- CMAKE_Fortran_IMPLICIT_LINK_DIRECTORIES: /usr/local/lib/gcc13;/usr/local/lib/gcc13/gcc/x86_64-portbld-freebsd14.2/13.3.0;/usr/local/x86_64-portbld-freebsd14.2/lib -- CMAKE_Fortran_IMPLICIT_LINK_LIBRARIES: gfortran;m;ssp_nonshared;gcc;gcc_s;quadmath;m;c;gcc;gcc_s CMake Warning (dev) at cmake/FindCython.cmake:31 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake/UseCython.cmake:74 (find_package) CMakeLists.txt:178 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/UseCython.cmake:75 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:178 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- LIBS: hdf5-shared;/usr/local/lib/libpython3.11.so -- decay.cpp exists, no need to download or extract! -- decay-linux-clang.s exists, no need to download or extract! -- cram.c exists, no need to download or extract! -- cram-linux-clang.s exists, no need to download or extract! -- Not fast compiling decay.cpp since PyNE fast compile is disabled. -- Not fast compiling cram.c since PyNE fast compile is disabled. -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Modules to Cythonize: ace;bins;data;dtypes;endf;enrichment;extra_types;jsoncpp;material;material_library;nucname;particle;pyne_config;rxname;source;stlcontainers;tally;transmuters;_utils -- F2PY F90 FLAGS: -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne/xs: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Configuring done (0.7s) -- Generating done (0.0s) -- Build files have been written to: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build [ 0%] Built target ReplicatePythonSourceTree [ 1%] Building CXX object src/CMakeFiles/pyne.dir/utils.cpp.o [ 2%] Linking CXX shared library libpyne.so [ 24%] Built target pyne [ 25%] Linking CXX shared module ace.so [ 27%] Built target ace [ 28%] Linking CXX shared module bins.so [ 31%] Built target bins [ 32%] Linking CXX shared module data.so [ 34%] Built target data [ 36%] Linking CXX shared module dtypes.so [ 38%] Built target dtypes [ 39%] Linking CXX shared module endf.so [ 42%] Built target endf [ 43%] Linking CXX shared module enrichment.so [ 45%] Built target enrichment [ 46%] Linking CXX shared module extra_types.so [ 49%] Built target extra_types [ 50%] Linking CXX shared module jsoncpp.so [ 53%] Built target jsoncpp [ 54%] Linking CXX shared module material.so [ 56%] Built target material [ 57%] Linking CXX shared module material_library.so [ 60%] Built target material_library [ 61%] Linking CXX shared module nucname.so [ 63%] Built target nucname [ 65%] Linking CXX shared module particle.so [ 67%] Built target particle [ 68%] Linking CXX shared module pyne_config.so [ 71%] Built target pyne_config [ 72%] Linking CXX shared module rxname.so [ 74%] Built target rxname [ 75%] Linking CXX shared module source.so [ 78%] Built target source [ 79%] Linking CXX shared module stlcontainers.so [ 81%] Built target stlcontainers [ 83%] Linking CXX shared module tally.so [ 85%] Built target tally [ 86%] Linking CXX shared module transmuters.so [ 89%] Built target transmuters [ 90%] Linking CXX shared module _utils.so [ 92%] Built target _utils [ 93%] Linking C shared module cram.so [ 96%] Built target cram [ 97%] Linking CXX shared module models.so [100%] Built target models NOTE: If you have not done so already, please be sure that your PATH has been appropriately set to the install prefix of pyne. For this install of pyne you may add the following lines to your '~/.bashrc' file or equivalent: # PyNE Environment Settings export PATH="/usr/local/bin:${PATH}" atomic_data.h generated is the same as existing file, skipping. atomic_data.cpp generated is the same as existing file, skipping. CMake command is cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local -DHDF5_ROOT=/usr/local -DHDF5_LIBRARIES=/usr/local/lib/libhdf5.so;/usr/local/lib/libhdf5_hl.so -DHDF5_LIBRARY_DIRS=/usr/local/lib -DHDF5_INCLUDE_DIRS=/usr/local/include -DWITH_MOAB=ON -DMOAB_ROOT=/usr/local -DPYNE_FAST_COMPILE=FALSE -DENABLE_SPATIAL_SOLVERS=ON -DPYTHON_EXECUTABLE=/usr/local/bin/python3.11 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-PyNE-0.7.8_3 depends on package: py311-future>0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-matplotlib>0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-numpy>=1.16,1<1.27,1 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-progress>0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-tables>0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-scipy>0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-tables>0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-pyyaml>=0 - found ===> py311-PyNE-0.7.8_3 depends on package: py311-OpenMC>0 - found ===> py311-PyNE-0.7.8_3 depends on executable: gfortran13 - found ===> py311-PyNE-0.7.8_3 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for py311-PyNE-0.7.8_3 ===> Generating temporary packing list cd /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8 && /usr/bin/env DESTDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py311 TMPDIR="/tmp" PATH=/usr/local/libexec/ccache:/wrkdirs/usr/ports/science/py-PyNE/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CCACHE_DIR="/root/.ccache" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" /usr/local/bin/python3.11 -c "import sys; import setuptools; __file__='setup.py'; sys.argv[0]='setup.py'; exec(compile(open(__file__, 'rb').read().replace(b'\\r\\n', b'\\n'), __file__, 'exec'))" install setup.py:38: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses import imp /usr/local/bin/cmake CMake Deprecation Warning at CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. / \ ) (( )) ( (@) /|\ ))_(( /|\ |-| / | \ (/\|/\) / | \ (@) | | -------------------/--|-voV---\`|'/--Vov-|--\---------------------|-| |-| '^` (o o) '^` | | | | `\Y/' |-| |-| | | | | /\ ___ __ __ /\ |-| |-| /^~\ / _ \_ _ /\ \ \/__\ /^~\ | | | | /^~\ / /_)/ | | |/ \/ /_\ /^~\ |-| |-| /^~\ / ___/| |_| / /\ //__ /^~\ | | | | ^||` \/ \__, \_\ \/\__/ ^||` |-| |-| || |____/ || | | | | ==== ==== |-| |-| | | | | |-| |-|___________________________________________________________________| | (@) l /\ / ( ( \ /\ l `\|-| l / V \ \ V \ l (@) l/ _) )_ \I `\ /' ` -- Pyne platform defined as: __LINUX__ -- Checking whether to build spatial solvers -- -- Checking CMAKE_CXX_COMPILER_ID: Clang -- Build spatial solvers: false -- Build type: Release -- PyNE Fast Compile: FALSE -- CMAKE_INSTALL_RPATH: /usr/local/lib:/usr/local/libexec/lib -- CMake Install Prefix: /usr/local -- Dependency Root Dir (DEPS_ROOT_DIR): /usr/local/libexec -- Dependency Hints (DEPS_HINTS): HINTS;/usr/local/libexec -- Dependency Binary Hints (DEPS_BIN_HINTS): HINTS;/usr/local/libexec;/usr/local/libexec/bin -- Dependency Library Hints (DEPS_LIB_HINTS): HINTS;/usr/local/libexec;/usr/local/libexec/lib -- Dependency Include Hints (DEPS_INCLUDE_HINTS): HINTS;/usr/local/libexec/include -- HDF5 Root: /usr/local -- HDF5 Include directory: /usr/local/include -- HDF5 Library directories: /usr/local/lib -- HDF5 Libraries: hdf5-shared -- HDF5 library version: 1.12.2 -- MOAB Root: /usr/local -- Could NOT find MOAB (missing: MOAB_INCLUDE_DIRS) -- MOAB Found: FALSE CMake Warning (dev) at CMakeLists.txt:139 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:140 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- PYTHON_EXECUTABLE: /usr/local/bin/python3.11 -- PYTHON_SITE_PACKAGES: /usr/local/lib/python3.11/site-packages CMake Warning (dev) at cmake/FindNumpy.cmake:28 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:157 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- NUMPY_VERSION_STRING = 1.26.4 -- CMAKE_Fortran_IMPLICIT_LINK_DIRECTORIES: /usr/local/lib/gcc13;/usr/local/lib/gcc13/gcc/x86_64-portbld-freebsd14.2/13.3.0;/usr/local/x86_64-portbld-freebsd14.2/lib -- CMAKE_Fortran_IMPLICIT_LINK_LIBRARIES: gfortran;m;ssp_nonshared;gcc;gcc_s;quadmath;m;c;gcc;gcc_s CMake Warning (dev) at cmake/FindCython.cmake:31 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): cmake/UseCython.cmake:74 (find_package) CMakeLists.txt:178 (include) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at cmake/UseCython.cmake:75 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:178 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- LIBS: hdf5-shared;/usr/local/lib/libpython3.11.so -- decay.cpp exists, no need to download or extract! -- decay-linux-clang.s exists, no need to download or extract! -- cram.c exists, no need to download or extract! -- cram-linux-clang.s exists, no need to download or extract! -- Not fast compiling decay.cpp since PyNE fast compile is disabled. -- Not fast compiling cram.c since PyNE fast compile is disabled. -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Modules to Cythonize: ace;bins;data;dtypes;endf;enrichment;extra_types;jsoncpp;material;material_library;nucname;particle;pyne_config;rxname;source;stlcontainers;tally;transmuters;_utils -- F2PY F90 FLAGS: -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/pyne/xs: /usr/local/include;/usr/local/lib/python3.11/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/src -- Configuring done (0.7s) -- Generating done (0.0s) -- Build files have been written to: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build [ 0%] Built target ReplicatePythonSourceTree [ 1%] Building CXX object src/CMakeFiles/pyne.dir/utils.cpp.o [ 2%] Linking CXX shared library libpyne.so [ 24%] Built target pyne [ 25%] Linking CXX shared module ace.so [ 27%] Built target ace [ 28%] Linking CXX shared module bins.so [ 31%] Built target bins [ 32%] Linking CXX shared module data.so [ 34%] Built target data [ 36%] Linking CXX shared module dtypes.so [ 38%] Built target dtypes [ 39%] Linking CXX shared module endf.so [ 42%] Built target endf [ 43%] Linking CXX shared module enrichment.so [ 45%] Built target enrichment [ 46%] Linking CXX shared module extra_types.so [ 49%] Built target extra_types [ 50%] Linking CXX shared module jsoncpp.so [ 53%] Built target jsoncpp [ 54%] Linking CXX shared module material.so [ 56%] Built target material [ 57%] Linking CXX shared module material_library.so [ 60%] Built target material_library [ 61%] Linking CXX shared module nucname.so [ 63%] Built target nucname [ 65%] Linking CXX shared module particle.so [ 67%] Built target particle [ 68%] Linking CXX shared module pyne_config.so [ 71%] Built target pyne_config [ 72%] Linking CXX shared module rxname.so [ 74%] Built target rxname [ 75%] Linking CXX shared module source.so [ 78%] Built target source [ 79%] Linking CXX shared module stlcontainers.so [ 81%] Built target stlcontainers [ 83%] Linking CXX shared module tally.so [ 85%] Built target tally [ 86%] Linking CXX shared module transmuters.so [ 89%] Built target transmuters [ 90%] Linking CXX shared module _utils.so [ 92%] Built target _utils [ 93%] Linking C shared module cram.so [ 96%] Built target cram [ 97%] Linking CXX shared module models.so [100%] Built target models [ 0%] Built target ReplicatePythonSourceTree [ 24%] Built target pyne [ 27%] Built target ace [ 31%] Built target bins [ 34%] Built target data [ 38%] Built target dtypes [ 42%] Built target endf [ 45%] Built target enrichment [ 49%] Built target extra_types [ 53%] Built target jsoncpp [ 56%] Built target material [ 60%] Built target material_library [ 63%] Built target nucname [ 67%] Built target particle [ 71%] Built target pyne_config [ 74%] Built target rxname [ 78%] Built target source [ 81%] Built target stlcontainers [ 85%] Built target tally [ 89%] Built target transmuters [ 92%] Built target _utils [ 96%] Built target cram [100%] Built target models Install the project... -- Install configuration: "Release" ############### Begin Python Install ############### -- Python installer: PYTHON_EXECUTABLE: /usr/local/bin/python3.11 CMAKE_INSTALL_PREFIX: /usr/local CMAKE_CURRENT_BINARY_DIR: /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build /wrkdirs/usr/ports/science/py-PyNE/work-py311/pyne-0.7.8/build/setup_sub.py:9: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses import imp running install /usr/local/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py creating build creating build/lib creating build/lib/pyne copying pyne/api.py -> build/lib/pyne copying pyne/gammaspec.py -> build/lib/pyne copying pyne/mesh.py -> build/lib/pyne copying pyne/ensdf_processing.py -> build/lib/pyne copying pyne/ensdf.py -> build/lib/pyne copying pyne/cccc.py -> build/lib/pyne copying pyne/fluka.py -> build/lib/pyne copying pyne/__init__.py -> build/lib/pyne copying pyne/openmc_utils.py -> build/lib/pyne copying pyne/origen22.py -> build/lib/pyne copying pyne/decay_tape9.py -> build/lib/pyne copying pyne/serpent.py -> build/lib/pyne copying pyne/endl.py -> build/lib/pyne copying pyne/spatialsolver.py -> build/lib/pyne copying pyne/binaryreader.py -> build/lib/pyne copying pyne/pyne_version.py -> build/lib/pyne copying pyne/fispact.py -> build/lib/pyne copying pyne/mcnp.py -> build/lib/pyne copying pyne/alara.py -> build/lib/pyne copying pyne/njoy.py -> build/lib/pyne copying pyne/partisn.py -> build/lib/pyne copying pyne/rxdata.py -> build/lib/pyne copying pyne/ptrac_to_hdf5.py -> build/lib/pyne copying pyne/r2s.py -> build/lib/pyne copying pyne/utils.py -> build/lib/pyne copying pyne/variancereduction.py -> build/lib/pyne copying pyne/spectanalysis.py -> build/lib/pyne copying pyne/_argparse.py -> build/lib/pyne creating build/lib/pyne/dbgen copying pyne/dbgen/api.py -> build/lib/pyne/dbgen copying pyne/dbgen/ndsfpy.py -> build/lib/pyne/dbgen copying pyne/dbgen/hashtools.py -> build/lib/pyne/dbgen copying pyne/dbgen/__init__.py -> build/lib/pyne/dbgen copying pyne/dbgen/dosefactors.py -> build/lib/pyne/dbgen copying pyne/dbgen/nuc_data_make.py -> build/lib/pyne/dbgen copying pyne/dbgen/cinder.py -> build/lib/pyne/dbgen copying pyne/dbgen/q_val.py -> build/lib/pyne/dbgen copying pyne/dbgen/scattering_lengths.py -> build/lib/pyne/dbgen copying pyne/dbgen/kaeri.py -> build/lib/pyne/dbgen copying pyne/dbgen/decay.py -> build/lib/pyne/dbgen copying pyne/dbgen/materials_library.py -> build/lib/pyne/dbgen copying pyne/dbgen/isotopic_abundance.py -> build/lib/pyne/dbgen copying pyne/dbgen/eaf.py -> build/lib/pyne/dbgen copying pyne/dbgen/wimsdfpy.py -> build/lib/pyne/dbgen copying pyne/dbgen/simple_xs.py -> build/lib/pyne/dbgen copying pyne/dbgen/atomic_mass.py -> build/lib/pyne/dbgen creating build/lib/pyne/apigen copying pyne/apigen/enrich_multi_sym.py -> build/lib/pyne/apigen copying pyne/apigen/main.py -> build/lib/pyne/apigen copying pyne/apigen/__init__.py -> build/lib/pyne/apigen copying pyne/apigen/utils.py -> build/lib/pyne/apigen creating build/lib/pyne/xs copying pyne/xs/api.py -> build/lib/pyne/xs copying pyne/xs/channels.py -> build/lib/pyne/xs copying pyne/xs/__init__.py -> build/lib/pyne/xs copying pyne/xs/data_source.py -> build/lib/pyne/xs copying pyne/xs/cache.py -> build/lib/pyne/xs creating build/lib/pyne/transmute copying pyne/transmute/__init__.py -> build/lib/pyne/transmute copying pyne/transmute/origen22.py -> build/lib/pyne/transmute copying pyne/transmute/chainsolve.py -> build/lib/pyne/transmute creating build/lib/pyne/gui copying pyne/gui/spectplots.py -> build/lib/pyne/gui copying pyne/gui/__init__.py -> build/lib/pyne/gui copying pyne/gui/aceviewer.py -> build/lib/pyne/gui copying pyne/gui/decaychain.py -> build/lib/pyne/gui creating build/lib/pyne/cli copying pyne/cli/__init__.py -> build/lib/pyne/cli copying pyne/cli/tape9.py -> build/lib/pyne/cli creating build/lib/pyne/fortranformat copying pyne/fortranformat/FortranRecordWriter.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/_misc.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/__init__.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/_parser.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/FortranRecordReader.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/config.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/_exceptions.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/_edit_descriptors.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/_input.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/_output.py -> build/lib/pyne/fortranformat copying pyne/fortranformat/_lexer.py -> build/lib/pyne/fortranformat copying pyne/cpp_rxname.pxd -> build/lib/pyne copying pyne/extra_types.pxd -> build/lib/pyne copying pyne/c_cram.pxd -> build/lib/pyne copying pyne/jsoncpp.pxd -> build/lib/pyne copying pyne/tally.pxd -> build/lib/pyne copying pyne/cpp_nucname.pxd -> build/lib/pyne copying pyne/cpp_material_library.pxd -> build/lib/pyne copying pyne/cpp_material.pxd -> build/lib/pyne copying pyne/source_sampling.pxd -> build/lib/pyne copying pyne/cpp_utils.pxd -> build/lib/pyne copying pyne/rxname.pxd -> build/lib/pyne copying pyne/material.pxd -> build/lib/pyne copying pyne/nucname.pxd -> build/lib/pyne copying pyne/enrichment.pxd -> build/lib/pyne copying pyne/stlcontainers.pxd -> build/lib/pyne copying pyne/cpp_source.pxd -> build/lib/pyne copying pyne/__init__.pxd -> build/lib/pyne copying pyne/material_library.pxd -> build/lib/pyne copying pyne/particle.pxd -> build/lib/pyne copying pyne/data.pxd -> build/lib/pyne copying pyne/source.pxd -> build/lib/pyne copying pyne/cpp_tally.pxd -> build/lib/pyne copying pyne/cpp_particle.pxd -> build/lib/pyne copying pyne/cpp_enrichment.pxd -> build/lib/pyne copying pyne/cpp_data.pxd -> build/lib/pyne copying pyne/cpp_jsoncpp.pxd -> build/lib/pyne copying pyne/cpp_transmuters.pxd -> build/lib/pyne copying pyne/cpp_dagmc_bridge.pxd -> build/lib/pyne copying pyne/dtypes.pxd -> build/lib/pyne copying pyne/pyne_config.pxd -> build/lib/pyne copying pyne/cpp_source_sampling.pxd -> build/lib/pyne copying pyne/base_tape9.inp -> build/lib/pyne copying pyne/nucname.so -> build/lib/pyne copying pyne/transmuters.so -> build/lib/pyne copying pyne/particle.so -> build/lib/pyne copying pyne/tally.so -> build/lib/pyne copying pyne/enrichment.so -> build/lib/pyne copying pyne/_utils.so -> build/lib/pyne copying pyne/rxname.so -> build/lib/pyne copying pyne/pyne_config.so -> build/lib/pyne copying pyne/jsoncpp.so -> build/lib/pyne copying pyne/cram.so -> build/lib/pyne copying pyne/bins.so -> build/lib/pyne copying pyne/material_library.so -> build/lib/pyne copying pyne/material.so -> build/lib/pyne copying pyne/source.so -> build/lib/pyne copying pyne/data.so -> build/lib/pyne copying pyne/stlcontainers.so -> build/lib/pyne copying pyne/endf.so -> build/lib/pyne copying pyne/extra_types.so -> build/lib/pyne copying pyne/ace.so -> build/lib/pyne copying pyne/dtypes.so -> build/lib/pyne copying pyne/dbgen/wimsd-fpyield.html -> build/lib/pyne/dbgen copying pyne/dbgen/scattering_lengths.html -> build/lib/pyne/dbgen copying pyne/dbgen/dosefactors_external_soil.csv -> build/lib/pyne/dbgen copying pyne/dbgen/q_val_light.csv -> build/lib/pyne/dbgen copying pyne/dbgen/dosefactors_external_air.csv -> build/lib/pyne/dbgen copying pyne/dbgen/dosefactors_inhale.csv -> build/lib/pyne/dbgen copying pyne/dbgen/dosefactors_ingest.csv -> build/lib/pyne/dbgen copying pyne/dbgen/materials_compendium.csv -> build/lib/pyne/dbgen copying pyne/dbgen/q_val_actinides.csv -> build/lib/pyne/dbgen copying pyne/dbgen/q_val_fissionproducts.csv -> build/lib/pyne/dbgen copying pyne/dbgen/abundances.txt -> build/lib/pyne/dbgen copying pyne/dbgen/mass.mas16 -> build/lib/pyne/dbgen copying pyne/dbgen/mednew.dat -> build/lib/pyne/dbgen copying pyne/xs/models.so -> build/lib/pyne/xs running build_scripts creating build/scripts-3.11 copying and adjusting scripts/ptrac_to_hdf5 -> build/scripts-3.11 copying and adjusting scripts/activation_responses.py -> build/scripts-3.11 copying and adjusting scripts/meshtal_to_mesh -> build/scripts-3.11 copying scripts/ssw_combine.py -> build/scripts-3.11 copying scripts/ubuntu.sh -> build/scripts-3.11 copying and adjusting scripts/aceviewer -> build/scripts-3.11 copying and adjusting scripts/tape9 -> build/scripts-3.11 copying and adjusting scripts/nuc_data_make -> build/scripts-3.11 copying and adjusting scripts/gtcadis.py -> build/scripts-3.11 copying and adjusting scripts/r2s.py -> build/scripts-3.11 copying and adjusting scripts/expand_tags.py -> build/scripts-3.11 changing mode of build/scripts-3.11/ptrac_to_hdf5 from 644 to 755 changing mode of build/scripts-3.11/activation_responses.py from 644 to 755 changing mode of build/scripts-3.11/meshtal_to_mesh from 644 to 755 changing mode of build/scripts-3.11/ssw_combine.py from 644 to 755 changing mode of build/scripts-3.11/ubuntu.sh from 644 to 755 changing mode of build/scripts-3.11/aceviewer from 644 to 755 changing mode of build/scripts-3.11/tape9 from 644 to 755 changing mode of build/scripts-3.11/nuc_data_make from 644 to 755 changing mode of build/scripts-3.11/gtcadis.py from 644 to 755 changing mode of build/scripts-3.11/r2s.py from 644 to 755 changing mode of build/scripts-3.11/expand_tags.py from 644 to 755 running install_lib creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11 creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/api.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/gammaspec.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_rxname.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/mesh.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/nucname.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/transmuters.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/ensdf_processing.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/particle.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/tally.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmute copying build/lib/pyne/transmute/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmute copying build/lib/pyne/transmute/origen22.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmute copying build/lib/pyne/transmute/chainsolve.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmute copying build/lib/pyne/enrichment.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/ensdf.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui copying build/lib/pyne/gui/spectplots.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui copying build/lib/pyne/gui/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui copying build/lib/pyne/gui/aceviewer.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui copying build/lib/pyne/gui/decaychain.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui copying build/lib/pyne/extra_types.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/_utils.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cccc.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/rxname.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/fluka.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/c_cram.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/openmc_utils.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/origen22.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/jsoncpp.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/decay_tape9.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/pyne_config.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/serpent.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/tally.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/endl.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_nucname.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/spatialsolver.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/binaryreader.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_material_library.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs copying build/lib/pyne/xs/api.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs copying build/lib/pyne/xs/channels.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs copying build/lib/pyne/xs/models.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs copying build/lib/pyne/xs/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs copying build/lib/pyne/xs/data_source.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs copying build/lib/pyne/xs/cache.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs copying build/lib/pyne/jsoncpp.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/pyne_version.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_material.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/source_sampling.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/FortranRecordWriter.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/_misc.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/_parser.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/FortranRecordReader.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/config.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/_exceptions.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/_edit_descriptors.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/_input.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/_output.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fortranformat/_lexer.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat copying build/lib/pyne/fispact.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_utils.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/mcnp.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/alara.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/rxname.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/material.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen copying build/lib/pyne/apigen/enrich_multi_sym.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen copying build/lib/pyne/apigen/main.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen copying build/lib/pyne/apigen/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen copying build/lib/pyne/apigen/utils.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen copying build/lib/pyne/nucname.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/wimsd-fpyield.html -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/api.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/dosefactors_external_soil.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/ndsfpy.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/hashtools.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/q_val_light.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/mednew.dat -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/dosefactors_external_air.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/dosefactors.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/dosefactors_inhale.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/dosefactors_ingest.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/materials_compendium.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/q_val_actinides.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/nuc_data_make.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/abundances.txt -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/cinder.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/q_val.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/scattering_lengths.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/kaeri.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/decay.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/scattering_lengths.html -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/materials_library.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/isotopic_abundance.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/eaf.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/wimsdfpy.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/q_val_fissionproducts.csv -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/simple_xs.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/atomic_mass.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/dbgen/mass.mas16 -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen copying build/lib/pyne/enrichment.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/stlcontainers.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/njoy.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/base_tape9.inp -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/partisn.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_source.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cram.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/bins.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/__init__.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/material_library.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/rxdata.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/material_library.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/particle.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/data.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/material.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/ptrac_to_hdf5.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/source.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/data.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/source.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/r2s.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/utils.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/variancereduction.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_tally.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_particle.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_enrichment.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_data.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_jsoncpp.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne creating /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cli copying build/lib/pyne/cli/__init__.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cli copying build/lib/pyne/cli/tape9.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cli copying build/lib/pyne/stlcontainers.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/endf.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/spectanalysis.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/extra_types.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_transmuters.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/_argparse.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/ace.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/dtypes.so -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_dagmc_bridge.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/dtypes.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/pyne_config.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne copying build/lib/pyne/cpp_source_sampling.pxd -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/api.py to api.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gammaspec.py to gammaspec.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/mesh.py to mesh.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/ensdf_processing.py to ensdf_processing.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmute/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmute/origen22.py to origen22.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmute/chainsolve.py to chainsolve.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/ensdf.py to ensdf.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui/spectplots.py to spectplots.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui/aceviewer.py to aceviewer.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/gui/decaychain.py to decaychain.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cccc.py to cccc.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fluka.py to fluka.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/openmc_utils.py to openmc_utils.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/origen22.py to origen22.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/decay_tape9.py to decay_tape9.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/serpent.py to serpent.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/endl.py to endl.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/spatialsolver.py to spatialsolver.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/binaryreader.py to binaryreader.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/api.py to api.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/channels.py to channels.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/data_source.py to data_source.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/cache.py to cache.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/pyne_version.py to pyne_version.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/FortranRecordWriter.py to FortranRecordWriter.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/_misc.py to _misc.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/_parser.py to _parser.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/FortranRecordReader.py to FortranRecordReader.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/config.py to config.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/_exceptions.py to _exceptions.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/_edit_descriptors.py to _edit_descriptors.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/_input.py to _input.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/_output.py to _output.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fortranformat/_lexer.py to _lexer.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/fispact.py to fispact.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/mcnp.py to mcnp.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/alara.py to alara.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen/enrich_multi_sym.py to enrich_multi_sym.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen/main.py to main.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/apigen/utils.py to utils.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/api.py to api.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/ndsfpy.py to ndsfpy.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/hashtools.py to hashtools.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/dosefactors.py to dosefactors.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/nuc_data_make.py to nuc_data_make.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/cinder.py to cinder.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/q_val.py to q_val.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/scattering_lengths.py to scattering_lengths.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/kaeri.py to kaeri.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/decay.py to decay.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/materials_library.py to materials_library.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/isotopic_abundance.py to isotopic_abundance.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/eaf.py to eaf.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/wimsdfpy.py to wimsdfpy.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/simple_xs.py to simple_xs.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dbgen/atomic_mass.py to atomic_mass.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/njoy.py to njoy.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/partisn.py to partisn.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/rxdata.py to rxdata.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/ptrac_to_hdf5.py to ptrac_to_hdf5.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/r2s.py to r2s.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/utils.py to utils.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/variancereduction.py to variancereduction.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cli/__init__.py to __init__.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cli/tape9.py to tape9.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/spectanalysis.py to spectanalysis.cpython-311.pyc byte-compiling /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/_argparse.py to _argparse.cpython-311.pyc running install_egg_info running egg_info creating pyne.egg-info writing pyne.egg-info/PKG-INFO writing dependency_links to pyne.egg-info/dependency_links.txt writing top-level names to pyne.egg-info/top_level.txt writing manifest file 'pyne.egg-info/SOURCES.txt' reading manifest file 'pyne.egg-info/SOURCES.txt' writing manifest file 'pyne.egg-info/SOURCES.txt' Copying pyne.egg-info to /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne-0.7.8-py3.11.egg-info running install_scripts copying build/scripts-3.11/ptrac_to_hdf5 -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/activation_responses.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/meshtal_to_mesh -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/ssw_combine.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/ubuntu.sh -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/aceviewer -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/tape9 -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/nuc_data_make -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/gtcadis.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/r2s.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin copying build/scripts-3.11/expand_tags.py -> /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/ptrac_to_hdf5 to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/activation_responses.py to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/meshtal_to_mesh to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/ssw_combine.py to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/ubuntu.sh to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/aceviewer to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/tape9 to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/nuc_data_make to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/gtcadis.py to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/r2s.py to 755 changing mode of /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/expand_tags.py to 755 ############### End Python Install ############### -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/_atomic_data.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/_decay.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/atomic_data.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/cram.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/dagmc_bridge.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/data.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/decay.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/enrichment.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/enrichment_cascade.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/enrichment_symbolic.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/extra_types.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/h5wrap.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/json-forwards.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/json.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/jsoncustomwriter.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/material.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/material_library.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/measure.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/nucname.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/particle.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/pyne.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/pyne_version.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/rxname.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/source.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/source_sampling.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/tally.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/transmuters.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/utils.h -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/include/pyne/cram.hpp -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/libpyne.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/libpyne.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/ace.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/ace.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/bins.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/bins.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/data.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/data.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dtypes.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/dtypes.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/endf.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/endf.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/enrichment.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/enrichment.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/extra_types.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/extra_types.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/jsoncpp.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/jsoncpp.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/material.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/material.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/material_library.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/material_library.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/nucname.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/nucname.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/particle.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/particle.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/pyne_config.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/pyne_config.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/rxname.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/rxname.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/source.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/source.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/stlcontainers.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/stlcontainers.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/tally.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/tally.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmuters.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/transmuters.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/_utils.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/_utils.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cram.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/cram.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" -- Installing: /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/models.so -- Set non-toolchain portion of runtime path of "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/models.so" to "/usr/local/lib:/usr/local/libexec/lib:/usr/local/lib" NOTE: If you have not done so already, please be sure that your PATH has been appropriately set to the install prefix of pyne. For this install of pyne you may add the following lines to your '~/.bashrc' file or equivalent: # PyNE Environment Settings export PATH="/usr/local/bin:${PATH}" atomic_data.h generated is the same as existing file, skipping. atomic_data.cpp generated is the same as existing file, skipping. CMake command is cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local -DENABLE_SPATIAL_SOLVERS=ON -DPYTHON_EXECUTABLE=/usr/local/bin/python3.11 install -m 0644 /portdistfiles/PyNE-0.7.8/prebuilt_nuc_data.h5 /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/nuc_data.h5 /bin/rm -f /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/bin/ubuntu.sh /usr/bin/strip /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/lib*.so /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/*.so /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/pyne/xs/models.so ====> Compressing man pages (compress-man) if [ -d "/wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/PyNE-0.7.8-py3.11.egg-info" ]; then /bin/ls /wrkdirs/usr/ports/science/py-PyNE/work-py311/stage/usr/local/lib/python3.11/site-packages/PyNE-0.7.8-py3.11.egg-info | while read f; do echo lib/python3.11/site-packages/PyNE-0.7.8-py3.11.egg-info/${f} >> /wrkdirs/usr/ports/science/py-PyNE/work-py311/.PLIST.mktmp; done; fi; =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2025-05-07T17:47:01+0000' 'PKG_NOTE_ports_top_git_hash=5529c5919b' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=06a08e69f3' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.2' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for py311-PyNE-0.7.8_3 ===> Building py311-PyNE-0.7.8_3 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for py311-PyNE-0.7.8_3 build of science/py-PyNE@py311 | py311-PyNE-0.7.8_3 ended at Wed May 7 18:59:27 BST 2025 build time: 00:12:27