=>> Building math/parmgridgen build started at Mon Apr 1 11:08:38 BST 2024 port directory: /usr/ports/math/parmgridgen package name: parmgridgen-1.0_17 building for: FreeBSD pkg-builder.dan.net.uk 13.2-RELEASE-p10 FreeBSD 13.2-RELEASE-p10 amd64 maintained by: devel@stasyan.com Makefile datestamp: -rw-r--r-- 1 root wheel 1428 Feb 19 23:05 /usr/ports/math/parmgridgen/Makefile Ports top last git commit: c2c35d895e Ports top unclean checkout: yes Port dir last git commit: 9eba6162f8 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.99.20240122_1 Host OSVERSION: 1400097 Jail OSVERSION: 1302001 Job Id: 13 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1302001 UNAME_v=FreeBSD 13.2-RELEASE-p10 UNAME_r=13.2-RELEASE-p10 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.99.20240122_1 MASTERMNT=/usr/local/poudriere/data/.m/13-amd64-default-dan/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/13-amd64-default-dan/13/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=13-amd64-default-dan SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/13-amd64-default-dan/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.99.20240122_1 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for parmgridgen-1.0_17: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- devel@stasyan.com --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/math/parmgridgen/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/parmgridgen/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/parmgridgen/work/.cache HOME=/wrkdirs/usr/ports/math/parmgridgen/work TMPDIR="/tmp" PATH=/ccache/libexec/ccache:/wrkdirs/usr/ports/math/parmgridgen/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/parmgridgen/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CCACHE_DIR="/root/.ccache" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/parmgridgen/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/parmgridgen/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/parmgridgen/work/.cache HOME=/wrkdirs/usr/ports/math/parmgridgen/work TMPDIR="/tmp" PATH=/ccache/libexec/ccache:/wrkdirs/usr/ports/math/parmgridgen/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/parmgridgen/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CCACHE_DIR="/root/.ccache" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" OSREL=13.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/parmgridgen" EXAMPLESDIR="share/examples/parmgridgen" DATADIR="share/parmgridgen" WWWDIR="www/parmgridgen" ETCDIR="etc/parmgridgen" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/parmgridgen DOCSDIR=/usr/local/share/doc/parmgridgen EXAMPLESDIR=/usr/local/share/examples/parmgridgen WWWDIR=/usr/local/www/parmgridgen ETCDIR=/usr/local/etc/parmgridgen --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### CCACHE_CPP2=1 WITH_SSP_PORTS=yes WITH_SSP=yes #WITH_LTO=yes DISABLE_LICENSES=yes LICENSES_ACCEPTED=AGPLv3 APACHE10 APACHE11 APACHE20 ART10 ARTPERL10 ART20 BSD BSD2CLAUSE BSD3CLAUSE BSD4CLAUSE BSL CC0-1.0 CDDL ClArtistic EPL GFDL GMGPL GPLv1 GPLv2 GPLv3 GPLv3RLE ISCL LGPL20 LGPL21 LGPL3 LPPL10 LPPL11 LPPL12 LPPL13 LPPL13a LPPL13b LPPL13c MIT MPL OpenSSL OFL10 OFL11 OWL PostgreSQL PHP202 PHP30 PHP301 PSFL RUBY ZLIB ZPL21 SVM-Light EULA ALASIR Microsoft-exFAT SIMIAN UDEVGAME unknown MTA COMMERCIAL teamspeak NO_LICENSES_DIALOGS=yes #### #### NO_IGNORE=yes DEFAULT_VERSIONS+=ssl=openssl mysql=8.0 imagemagick=7 samba=4.13 java=18 WITH_SETID_MODE=force PHP_ZTS=enabled OPTIONS_UNSET+=OPENJPEG OPTIONS_UNSET+=GSSAPI_BASE OPTIONS_SET+=ZTS OPTIONS_SET+=GSSAPI_NONE WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache NO_CCACHE_DEPEND=1 CCACHE_WRAPPER_PATH= /ccache/libexec/ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> parmgridgen-1.0_17 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.20.9_1.pkg [pkg-builder.dan.net.uk] Installing pkg-1.20.9_1... [pkg-builder.dan.net.uk] Extracting pkg-1.20.9_1: .......... done ===> parmgridgen-1.0_17 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of parmgridgen-1.0_17 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by parmgridgen-1.0_17 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by parmgridgen-1.0_17 for building => SHA256 Checksum OK for ParMGridGen-1.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by parmgridgen-1.0_17 for building ===> Extracting for parmgridgen-1.0_17 => SHA256 Checksum OK for ParMGridGen-1.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for parmgridgen-1.0_17 ===> Applying FreeBSD patches for parmgridgen-1.0_17 from /usr/ports/math/parmgridgen/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> parmgridgen-1.0_17 depends on package: gmake>=4.4.1 - not found ===> Installing existing package /packages/All/gmake-4.4.1.pkg [pkg-builder.dan.net.uk] Installing gmake-4.4.1... [pkg-builder.dan.net.uk] `-- Installing gettext-runtime-0.22.3_1... [pkg-builder.dan.net.uk] | `-- Installing indexinfo-0.3.1... [pkg-builder.dan.net.uk] | `-- Extracting indexinfo-0.3.1: . done [pkg-builder.dan.net.uk] `-- Extracting gettext-runtime-0.22.3_1: .......... done [pkg-builder.dan.net.uk] Extracting gmake-4.4.1: .......... done ===> parmgridgen-1.0_17 depends on package: gmake>=4.4.1 - found ===> Returning to build of parmgridgen-1.0_17 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> parmgridgen-1.0_17 depends on shared library: libmpi_cxx.so - not found ===> Installing existing package /packages/All/openmpi4-4.1.6.pkg [pkg-builder.dan.net.uk] Installing openmpi4-4.1.6... [pkg-builder.dan.net.uk] `-- Installing gcc13-13.2.0_4... [pkg-builder.dan.net.uk] | `-- Installing binutils-2.40_5,1... [pkg-builder.dan.net.uk] | | `-- Installing zstd-1.5.5_1... [pkg-builder.dan.net.uk] | | `-- Installing liblz4-1.9.4_1,1... [pkg-builder.dan.net.uk] | | `-- Extracting liblz4-1.9.4_1,1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting zstd-1.5.5_1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting binutils-2.40_5,1: .......... done [pkg-builder.dan.net.uk] | `-- Installing gmp-6.3.0... [pkg-builder.dan.net.uk] | `-- Extracting gmp-6.3.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing mpc-1.3.1_1... [pkg-builder.dan.net.uk] | | `-- Installing mpfr-4.2.1,1... [pkg-builder.dan.net.uk] | | `-- Extracting mpfr-4.2.1,1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting mpc-1.3.1_1: ...... done [pkg-builder.dan.net.uk] `-- Extracting gcc13-13.2.0_4: .......... done create symlink for gcc13 create symlink for gcc13 (world) create symlink for g++13 create symlink for g++13 (world) create symlink for cpp13 create symlink for cpp13 (world) [pkg-builder.dan.net.uk] `-- Installing hwloc2-2.8.0_1... [pkg-builder.dan.net.uk] | `-- Installing level-zero-1.16.1... [pkg-builder.dan.net.uk] | `-- Extracting level-zero-1.16.1: .......... done [pkg-builder.dan.net.uk] | `-- Installing libpciaccess-0.18... [pkg-builder.dan.net.uk] | `-- Extracting libpciaccess-0.18: ..... done [pkg-builder.dan.net.uk] | `-- Installing libxml2-2.11.7... [pkg-builder.dan.net.uk] | | `-- Installing readline-8.2.10... [pkg-builder.dan.net.uk] | | `-- Extracting readline-8.2.10: .......... done [pkg-builder.dan.net.uk] | `-- Extracting libxml2-2.11.7: .......... done [pkg-builder.dan.net.uk] `-- Extracting hwloc2-2.8.0_1: .......... done [pkg-builder.dan.net.uk] `-- Installing libevent-2.1.12... [pkg-builder.dan.net.uk] | `-- Installing openssl-3.0.13_1,1... [pkg-builder.dan.net.uk] | `-- Extracting openssl-3.0.13_1,1: .......... done [pkg-builder.dan.net.uk] `-- Extracting libevent-2.1.12: .......... done [pkg-builder.dan.net.uk] `-- Installing libltdl-2.4.7... [pkg-builder.dan.net.uk] `-- Extracting libltdl-2.4.7: ......... done [pkg-builder.dan.net.uk] `-- Installing munge-0.5.15_2... [pkg-builder.dan.net.uk] | `-- Installing libgcrypt-1.10.3_1... [pkg-builder.dan.net.uk] | | `-- Installing libgpg-error-1.48... [pkg-builder.dan.net.uk] | | `-- Extracting libgpg-error-1.48: .......... done [pkg-builder.dan.net.uk] | `-- Extracting libgcrypt-1.10.3_1: .......... done [pkg-builder.dan.net.uk] `-- Extracting munge-0.5.15_2: ......... done [pkg-builder.dan.net.uk] `-- Installing slurm-wlm-23.11.1_1... [pkg-builder.dan.net.uk] | `-- Installing check-0.15.2_1... [pkg-builder.dan.net.uk] | `-- Extracting check-0.15.2_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing dbus-1.14.10_4,1... [pkg-builder.dan.net.uk] | | `-- Installing expat-2.6.1... [pkg-builder.dan.net.uk] | | `-- Extracting expat-2.6.1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libICE-1.1.0_2,1... [pkg-builder.dan.net.uk] | | `-- Extracting libICE-1.1.0_2,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libSM-1.2.3_1,1... [pkg-builder.dan.net.uk] | | `-- Extracting libSM-1.2.3_1,1: ........ done [pkg-builder.dan.net.uk] | | `-- Installing libX11-1.8.7_1,1... [pkg-builder.dan.net.uk] | | `-- Installing libxcb-1.16.1... [pkg-builder.dan.net.uk] | | | `-- Installing libXau-1.0.9_1... [pkg-builder.dan.net.uk] | | | `-- Extracting libXau-1.0.9_1: .......... done [pkg-builder.dan.net.uk] | | | `-- Installing libXdmcp-1.1.5... [pkg-builder.dan.net.uk] | | | `-- Installing xorgproto-2023.2... [pkg-builder.dan.net.uk] | | | `-- Extracting xorgproto-2023.2: .......... done [pkg-builder.dan.net.uk] | | | `-- Extracting libXdmcp-1.1.5: ...... done [pkg-builder.dan.net.uk] | | `-- Extracting libxcb-1.16.1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libX11-1.8.7_1,1: .......... done ===> Creating groups. Creating group 'messagebus' with gid '556'. ===> Creating users Creating user 'messagebus' with uid '556'. [pkg-builder.dan.net.uk] | `-- Extracting dbus-1.14.10_4,1: ......... done [pkg-builder.dan.net.uk] | `-- Installing hdf5-1.12.2_2,1... [pkg-builder.dan.net.uk] | `-- Extracting hdf5-1.12.2_2,1: .......... done [pkg-builder.dan.net.uk] | `-- Installing http-parser-2.9.4... [pkg-builder.dan.net.uk] | `-- Extracting http-parser-2.9.4: .... done [pkg-builder.dan.net.uk] | `-- Installing json-c-0.17... [pkg-builder.dan.net.uk] | `-- Extracting json-c-0.17: .......... done [pkg-builder.dan.net.uk] | `-- Installing libaec-1.1.2... [pkg-builder.dan.net.uk] | `-- Extracting libaec-1.1.2: .......... done [pkg-builder.dan.net.uk] | `-- Installing libjwt-1.17.0... [pkg-builder.dan.net.uk] | | `-- Installing jansson-2.14... [pkg-builder.dan.net.uk] | | `-- Extracting jansson-2.14: ....... done [pkg-builder.dan.net.uk] | `-- Extracting libjwt-1.17.0: ........ done [pkg-builder.dan.net.uk] | `-- Installing librdkafka-2.3.0... [pkg-builder.dan.net.uk] | | `-- Installing curl-8.6.0... [pkg-builder.dan.net.uk] | | `-- Installing brotli-1.1.0,1... [pkg-builder.dan.net.uk] | | `-- Extracting brotli-1.1.0,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libidn2-2.3.7... [pkg-builder.dan.net.uk] | | | `-- Installing libunistring-1.2... [pkg-builder.dan.net.uk] | | | `-- Extracting libunistring-1.2: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libidn2-2.3.7: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libnghttp2-1.60.0... [pkg-builder.dan.net.uk] | | `-- Extracting libnghttp2-1.60.0: ....... done [pkg-builder.dan.net.uk] | | `-- Installing librtmp-2.4.20190330_1... [pkg-builder.dan.net.uk] | | `-- Extracting librtmp-2.4.20190330_1: ......... done [pkg-builder.dan.net.uk] | | `-- Installing libssh2-1.11.0_1,3... [pkg-builder.dan.net.uk] | | `-- Extracting libssh2-1.11.0_1,3: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting curl-8.6.0: .......... done [pkg-builder.dan.net.uk] | `-- Extracting librdkafka-2.3.0: .......... done [pkg-builder.dan.net.uk] | `-- Installing libsysinfo-0.0.3_3... [pkg-builder.dan.net.uk] | `-- Extracting libsysinfo-0.0.3_3: ...... done [pkg-builder.dan.net.uk] | `-- Installing libunwind-20240221... [pkg-builder.dan.net.uk] | `-- Extracting libunwind-20240221: .......... done [pkg-builder.dan.net.uk] | `-- Installing libyaml-0.2.5... [pkg-builder.dan.net.uk] | `-- Extracting libyaml-0.2.5: ...... done [pkg-builder.dan.net.uk] | `-- Installing lua54-5.4.6_1... [pkg-builder.dan.net.uk] | | `-- Installing libedit-3.1.20230828_1,1... [pkg-builder.dan.net.uk] | | `-- Extracting libedit-3.1.20230828_1,1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting lua54-5.4.6_1: .......... done [pkg-builder.dan.net.uk] | `-- Installing mysql80-client-8.0.35... [pkg-builder.dan.net.uk] | | `-- Installing cyrus-sasl-2.1.28_4... *** Added group `cyrus' (id 60) *** Added user `cyrus' (id 60) [pkg-builder.dan.net.uk] | | `-- Extracting cyrus-sasl-2.1.28_4: .......... done [pkg-builder.dan.net.uk] | | `-- Installing groff-1.23.0_3... [pkg-builder.dan.net.uk] | | `-- Installing libiconv-1.17_1... [pkg-builder.dan.net.uk] | | `-- Extracting libiconv-1.17_1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing perl5-5.36.3_1... [pkg-builder.dan.net.uk] | | `-- Extracting perl5-5.36.3_1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing psutils-1.17_6... [pkg-builder.dan.net.uk] | | | `-- Installing libpaper-1.1.28_1... [pkg-builder.dan.net.uk] | | | `-- Extracting libpaper-1.1.28_1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting psutils-1.17_6: .......... done [pkg-builder.dan.net.uk] | | `-- Installing uchardet-0.0.8_1... [pkg-builder.dan.net.uk] | | `-- Extracting uchardet-0.0.8_1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting groff-1.23.0_3: .......... done [pkg-builder.dan.net.uk] | | `-- Installing hidapi-0.14.0... [pkg-builder.dan.net.uk] | | `-- Extracting hidapi-0.14.0: .......... done [pkg-builder.dan.net.uk] | | `-- Installing icu-74.2,1... [pkg-builder.dan.net.uk] | | `-- Extracting icu-74.2,1: .......... done [pkg-builder.dan.net.uk] | | `-- Installing libfido2-1.14.0... [pkg-builder.dan.net.uk] | | `-- Installing libcbor-0.11.0... [pkg-builder.dan.net.uk] | | | `-- Installing libcjson-1.7.17... [pkg-builder.dan.net.uk] | | | `-- Extracting libcjson-1.7.17: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libcbor-0.11.0: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting libfido2-1.14.0: .......... done [pkg-builder.dan.net.uk] | | `-- Installing openldap26-client-2.6.7... [pkg-builder.dan.net.uk] | | `-- Extracting openldap26-client-2.6.7: .......... done [pkg-builder.dan.net.uk] | `-- Extracting mysql80-client-8.0.35: .......... done [pkg-builder.dan.net.uk] | `-- Installing onetbb-2021.11.0... [pkg-builder.dan.net.uk] | `-- Extracting onetbb-2021.11.0: .......... done ===> Creating groups. Creating group 'slurm' with gid '468'. ===> Creating users Creating user 'slurm' with uid '468'. [pkg-builder.dan.net.uk] `-- Extracting slurm-wlm-23.11.1_1: .......... done [pkg-builder.dan.net.uk] Extracting openmpi4-4.1.6: .......... done ===== Message from gcc13-13.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from cyrus-sasl-2.1.28_4: -- You can use sasldb2 for authentication, to add users use: saslpasswd2 -c username If you want to enable SMTP AUTH with the system Sendmail, read Sendmail.README NOTE: This port has been compiled with a default pwcheck_method of auxprop. If you want to authenticate your user by /etc/passwd, PAM or LDAP, install ports/security/cyrus-sasl2-saslauthd and set sasl_pwcheck_method to saslauthd after installing the Cyrus-IMAPd 2.X port. You should also check the /usr/local/lib/sasl2/*.conf files for the correct pwcheck_method. If you want to use GSSAPI mechanism, install ports/security/cyrus-sasl2-gssapi. If you want to use SRP mechanism, install ports/security/cyrus-sasl2-srp. If you want to use LDAP auxprop plugin, install ports/security/cyrus-sasl2-ldapdb. ===== Message from groff-1.23.0_3: -- In order to be able to use the html driver, you need to install the following packages: - ghostscript - netpbm ===== Message from openldap26-client-2.6.7: -- The OpenLDAP client package has been successfully installed. Edit /usr/local/etc/openldap/ldap.conf to change the system-wide client defaults. Try `man ldap.conf' and visit the OpenLDAP FAQ-O-Matic at http://www.OpenLDAP.org/faq/index.cgi?file=3 for more information. ===== Message from mysql80-client-8.0.35: -- This is the mysql CLIENT without the server. for complete server and client, please install databases/mysql80-server ===== Message from slurm-wlm-23.11.1_1: -- ===> NOTICE: The slurm-wlm port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from openmpi4-4.1.6: -- ===> NOTICE: The openmpi4 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> parmgridgen-1.0_17 depends on shared library: libmpi_cxx.so - found (/usr/local/mpi/openmpi/lib/libmpi_cxx.so) ===> Returning to build of parmgridgen-1.0_17 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for parmgridgen-1.0_17 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for parmgridgen-1.0_17 (cd MGridGen ; gmake) gmake[1]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen' (cd IMlib ; gmake ) gmake[2]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen/IMlib' cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c blas.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c dfkeysort.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c dkeysort.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c file.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c ifkeysort.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c ifloatsort.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c iintsort.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c ikeysort.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c memory.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c sort.c sort.c:66:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&counts, LTERM); ^ sort.c:106:1: warning: non-void function does not return a value in all control paths [-Wreturn-type] } ^ 2 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I/usr/local/include -I/usr/local/mpi/openmpi/include -c util.c ar rv libIMlib.a blas.o dfkeysort.o dkeysort.o file.o ifkeysort.o ifloatsort.o iintsort.o ikeysort.o memory.o sort.o util.o ar: warning: creating libIMlib.a a - blas.o a - dfkeysort.o a - dkeysort.o a - file.o a - ifkeysort.o a - ifloatsort.o a - iintsort.o a - ikeysort.o a - memory.o a - sort.o a - util.o ar -ts libIMlib.a blas.o dfkeysort.o dkeysort.o file.o ifkeysort.o ifloatsort.o iintsort.o ikeysort.o memory.o sort.o util.o gmake[2]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen/IMlib' (cd Lib ; gmake ) gmake[2]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen/Lib' cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c coarsen.c coarsen.c:83:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&(cgraph->finer->where), LTERM); ^ coarsen.c:92:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&(cgraph->where), LTERM); ^ 2 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c kwayfm.c kwayfm.c:149:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &phtable, °rees, &ptarget, LTERM); ^ kwayfm.c:286:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &phtable, °rees, &ptarget, LTERM); ^ kwayfm.c:416:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &phtable, °rees, &ptarget, LTERM); ^ kwayfm.c:582:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &phtable, °rees, &ptarget, LTERM); ^ kwayfm.c:727:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &phtable, °rees, &ptarget, LTERM); ^ kwayfm.c:925:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &phtable, °rees, &ptarget, LTERM); ^ kwayfm.c:1112:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &phtable, °rees, &ptarget, LTERM); ^ kwayfm.c:1164:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&pwgts, &pvol, &psurf, LTERM); ^ 8 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c match.c match.c:58:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&match, &perm, LTERM); ^ match.c:123:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&tperm, &perm, &match, LTERM); ^ match.c:193:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&tperm, &perm, &match, LTERM); ^ match.c:262:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&perm, &match, LTERM); ^ match.c:342:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&cand, &perm, &match, LTERM); ^ 5 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c merge.c merge.c:32:4: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->pwgts, &graph->pvol, &graph->psurf, LTERM); ^ merge.c:276:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:443:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:628:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:848:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:1042:23: warning: format specifies type 'int' but the argument has type 'realtype *' (aka 'double *') [-Wformat] degrees, me, to, jbest2, best, pmax, maxar)); ^~~~~~~ ./macros.h:18:46: note: expanded from macro 'IFSET' #define IFSET(a, flag, cmd) if ((a)&(flag)) (cmd); ^~~ merge.c:1067:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:1150:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, LTERM); ^ merge.c:1238:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:1321:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, LTERM); ^ merge.c:1410:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:1493:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, LTERM); ^ merge.c:1598:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ merge.c:1682:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, LTERM); ^ merge.c:1821:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&ptr, &ind, &psurf, &pvol, &pwgts, &elpairs, &ptarget, °rees, &phtable, LTERM); ^ 15 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c mgridgen.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c refine.c refine.c:77:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->pwgts, &graph->pvol, &graph->psurf, LTERM); ^ refine.c:130:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&pairs, LTERM); ^ refine.c:243:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&(graph->coarser), LTERM); ^ refine.c:308:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&counts,LTERM); ^ refine.c:378:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&touched, &cptr, &cind, &perm, &todo, LTERM); ^ 5 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c setup.c setup.c:52:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->xadj, &graph->vwgt, &graph->vvol, &graph->vsurf, ^ 1 warning generated. ar rv ../../libmgrid.a coarsen.o kwayfm.o match.o merge.o mgridgen.o refine.o setup.o ../IMlib/blas.o ../IMlib/dfkeysort.o ../IMlib/dkeysort.o ../IMlib/file.o ../IMlib/ifkeysort.o ../IMlib/ifloatsort.o ../IMlib/iintsort.o ../IMlib/ikeysort.o ../IMlib/memory.o ../IMlib/sort.o ../IMlib/util.o ar: warning: creating ../../libmgrid.a a - coarsen.o a - kwayfm.o a - match.o a - merge.o a - mgridgen.o a - refine.o a - setup.o a - ../IMlib/blas.o a - ../IMlib/dfkeysort.o a - ../IMlib/dkeysort.o a - ../IMlib/file.o a - ../IMlib/ifkeysort.o a - ../IMlib/ifloatsort.o a - ../IMlib/iintsort.o a - ../IMlib/ikeysort.o a - ../IMlib/memory.o a - ../IMlib/sort.o a - ../IMlib/util.o ar -ts ../../libmgrid.a coarsen.o kwayfm.o match.o merge.o mgridgen.o refine.o setup.o blas.o dfkeysort.o dkeysort.o file.o ifkeysort.o ifloatsort.o iintsort.o ikeysort.o memory.o sort.o util.o gmake[2]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen/Lib' (cd Programs ; gmake ) gmake[2]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen/Programs' cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include -I/usr/local/mpi/openmpi/include -I../../MGridGen/IMlib -I../Lib -c mgridgen.c mgridgen.c:75:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph.xadj, &graph.vvol, &graph.vsurf, &graph.adjncy, &graph.adjwgt, &part, LTERM); ^ 1 warning generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include -I/usr/local/mpi/openmpi/include -I../../MGridGen/IMlib -I../Lib -c io.c cc -L../.. -L/usr/lib/ -L//usr/local/lib/ -L//usr/local/mpi/openmpi/lib -o ../../mgridgen mgridgen.o io.o -lmgrid -lm -pthread chmod 744 ../../mgridgen gmake[2]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen/Programs' gmake[1]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/MGridGen' (cd ParMGridGen ; gmake) gmake[1]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen' (cd IMParMetis-2.0 ; gmake ) gmake[2]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/IMParMetis-2.0' (cd ParMETISLib ; gmake ) gmake[3]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/IMParMetis-2.0/ParMETISLib' cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c fused.c fused.c:55:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->vwgt, LTERM); ^ fused.c:192:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&map, LTERM); ^ 2 warnings generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c comm.c cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c util.c util.c:28:19: warning: format string is not a string literal (potentially insecure) [-Wformat-security] fprintf(stdout, out2); ^~~~ util.c:28:19: note: treat the string as an argument to avoid this fprintf(stdout, out2); ^ "%s", util.c:49:19: warning: format string is not a string literal (potentially insecure) [-Wformat-security] fprintf(stdout, out2); ^~~~ util.c:49:19: note: treat the string as an argument to avoid this fprintf(stdout, out2); ^ "%s", util.c:85:17: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] return (int *)IMmalloc(sizeof(int)*n, msg); ^ util.c:85:10: warning: cast to 'int *' from smaller integer type 'int' [-Wint-to-pointer-cast] return (int *)IMmalloc(sizeof(int)*n, msg); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:97:21: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] return (idxtype *)IMmalloc(sizeof(idxtype)*n, msg); ^ util.c:97:10: warning: cast to 'idxtype *' (aka 'int *') from smaller integer type 'int' [-Wint-to-pointer-cast] return (idxtype *)IMmalloc(sizeof(idxtype)*n, msg); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:108:19: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] return (float *)IMmalloc(sizeof(float)*n, msg); ^ util.c:108:10: warning: cast to 'float *' from smaller integer type 'int' [-Wint-to-pointer-cast] return (float *)IMmalloc(sizeof(float)*n, msg); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:120:22: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] return (realtype *)IMmalloc(sizeof(realtype)*n, msg); ^ util.c:120:10: warning: cast to 'realtype *' (aka 'double *') from smaller integer type 'int' [-Wint-to-pointer-cast] return (realtype *)IMmalloc(sizeof(realtype)*n, msg); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:132:31: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] return iset(n, ival, (int *)IMmalloc(sizeof(int)*n, msg)); ^ util.c:132:24: warning: cast to 'int *' from smaller integer type 'int' [-Wint-to-pointer-cast] return iset(n, ival, (int *)IMmalloc(sizeof(int)*n, msg)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:145:37: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] return idxset(n, ival, (idxtype *)IMmalloc(sizeof(idxtype)*n, msg)); ^ util.c:145:26: warning: cast to 'idxtype *' (aka 'int *') from smaller integer type 'int' [-Wint-to-pointer-cast] return idxset(n, ival, (idxtype *)IMmalloc(sizeof(idxtype)*n, msg)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:156:39: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] return realset(n, rval, (realtype *)IMmalloc(sizeof(realtype)*n, msg)); ^ util.c:156:27: warning: cast to 'realtype *' (aka 'double *') from smaller integer type 'int' [-Wint-to-pointer-cast] return realset(n, rval, (realtype *)IMmalloc(sizeof(realtype)*n, msg)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:388:1: warning: non-void function does not return a value in all control paths [-Wreturn-type] } ^ 17 warnings generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c memory.c memory.c:24:30: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] wspace->core = (idxtype *) IMmalloc(wspace->maxcore, "PreAllocateMemory: wspace->core"); ^ memory.c:24:18: warning: cast to 'idxtype *' (aka 'int *') from smaller integer type 'int' [-Wint-to-pointer-cast] wspace->core = (idxtype *) IMmalloc(wspace->maxcore, "PreAllocateMemory: wspace->core"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ memory.c:35:22: warning: cast to 'KeyValueType *' (aka 'struct KeyValueType *') from smaller integer type 'int' [-Wint-to-pointer-cast] wspace->pepairs1 = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*(ctrl->nparts+ctrl->npes+1), "PreAllocateMemory: wspace->pepairs?"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ memory.c:36:22: warning: cast to 'KeyValueType *' (aka 'struct KeyValueType *') from smaller integer type 'int' [-Wint-to-pointer-cast] wspace->pepairs2 = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*(ctrl->nparts+ctrl->npes+1), "PreAllocateMemory: wspace->pepairs?"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ memory.c:46:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&wspace->core, ^ memory.c:74:24: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] graph = (GraphType *)IMmalloc(sizeof(GraphType), "CreateCoarseGraph: graph"); ^ memory.c:74:11: warning: cast to 'GraphType *' (aka 'struct graphdef *') from smaller integer type 'int' [-Wint-to-pointer-cast] graph = (GraphType *)IMmalloc(sizeof(GraphType), "CreateCoarseGraph: graph"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ memory.c:121:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->xadj, ^ memory.c:161:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->xadj, ^ memory.c:211:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->match, ^ 10 warnings generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c debug.c debug.c:28:69: warning: format specifies type 'short' but the argument has type 'int' [-Wformat] printf("[%d %d.%hd] ", first+i, (vec[i]>=KEEP_BIT ? 1 : 0), (vec[i]>=KEEP_BIT ? vec[i]-KEEP_BIT : vec[i])); ~~~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ %d 1 warning generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c setup.c setup.c:198:37: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] wspace->pairs = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*wspace->nlarge, "SetUp: wspace->pairs"); ^ setup.c:198:21: warning: cast to 'KeyValueType *' (aka 'struct KeyValueType *') from smaller integer type 'int' [-Wint-to-pointer-cast] wspace->pairs = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*wspace->nlarge, "SetUp: wspace->pairs"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2 warnings generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c diffuse.c diffuse.c:57:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->vsize, LTERM); ^ 1 warning generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c grsetup.c grsetup.c:143:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&lpvtxs, &gpvtxs, LTERM); ^ 1 warning generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c timer.c cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c coarsen.c coarsen.c:308:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&cadjncy, &cadjwgt, &graph->where, LTERM); /* Note that graph->where works fine even if it is NULL */ ^ 1 warning generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c edge_refine.c edge_refine.c:152:39: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] rinfo = graph->rinfo = (RInfoType *)IMmalloc(sizeof(RInfoType)*nvtxs, "ComputePartitionParams: rinfo"); ^ edge_refine.c:152:26: warning: cast to 'RInfoType *' (aka 'struct rinfodef *') from smaller integer type 'int' [-Wint-to-pointer-cast] rinfo = graph->rinfo = (RInfoType *)IMmalloc(sizeof(RInfoType)*nvtxs, "ComputePartitionParams: rinfo"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ edge_refine.c:489:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&update, &nupds_pe, &htable, &changed, &pperm, &perm, LTERM); ^ edge_refine.c:823:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&update, &nupds_pe, &htable, &changed, &perm, &pperm, &tocheck, LTERM); ^ 4 warnings generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c drivers.c cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c remap.c remap.c:69:29: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] order = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*npes*npes, "ComputeTotalVReMap: order"); ^ remap.c:69:13: warning: cast to 'KeyValueType *' (aka 'struct KeyValueType *') from smaller integer type 'int' [-Wint-to-pointer-cast] order = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*npes*npes, "ComputeTotalVReMap: order"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ remap.c:73:29: warning: implicit declaration of function 'IMmalloc' is invalid in C99 [-Wimplicit-function-declaration] order = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*npes, "ComputeTotalVReMap: order"); ^ remap.c:73:13: warning: cast to 'KeyValueType *' (aka 'struct KeyValueType *') from smaller integer type 'int' [-Wint-to-pointer-cast] order = (KeyValueType *)IMmalloc(sizeof(KeyValueType)*npes, "ComputeTotalVReMap: order"); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ remap.c:142:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&order, LTERM); ^ 5 warnings generated. cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c iidxsort.c cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c ikeysort.c cc -I/usr/local/include -I/usr/local/mpi/openmpi/include -I./ -c var.c ar rv ../libIMparmetis.a fused.o comm.o util.o memory.o debug.o setup.o diffuse.o grsetup.o timer.o coarsen.o edge_refine.o drivers.o remap.o iidxsort.o ikeysort.o var.o ar: warning: creating ../libIMparmetis.a a - fused.o a - comm.o a - util.o a - memory.o a - debug.o a - setup.o a - diffuse.o a - grsetup.o a - timer.o a - coarsen.o a - edge_refine.o a - drivers.o a - remap.o a - iidxsort.o a - ikeysort.o a - var.o ar -ts ../libIMparmetis.a fused.o comm.o util.o memory.o debug.o setup.o diffuse.o grsetup.o timer.o coarsen.o edge_refine.o drivers.o remap.o iidxsort.o ikeysort.o var.o gmake[3]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/IMParMetis-2.0/ParMETISLib' gmake[2]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/IMParMetis-2.0' (cd ParLib ; gmake ) gmake[2]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/ParLib' cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c comm.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c util.c util.c:28:19: warning: format string is not a string literal (potentially insecure) [-Wformat-security] fprintf(stdout, out2); ^~~~ util.c:28:19: note: treat the string as an argument to avoid this fprintf(stdout, out2); ^ "%s", util.c:49:19: warning: format string is not a string literal (potentially insecure) [-Wformat-security] fprintf(stdout, out2); ^~~~ util.c:49:19: note: treat the string as an argument to avoid this fprintf(stdout, out2); ^ "%s", 2 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c memory.c memory.c:50:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&wspace->core, ^ memory.c:122:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->xadj, ^ memory.c:169:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->xadj, ^ 3 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c debug.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c setup.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c parmgridgen.c parmgridgen.c:110:3: warning: implicit declaration of function 'MGridGen' is invalid in C99 [-Wimplicit-function-declaration] MGridGen(nvtxs, orxadj, myvvol, orvsurf, oradjncy, oradjwgt, minsize, maxsize, ^ parmgridgen.c:117:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&orxadj, &oradjncy, &oradjwgt, &orvsurf, LTERM); ^ parmgridgen.c:272:6: warning: implicit declaration of function 'ParMETIS_FusedElementGraph' is invalid in C99 [-Wimplicit-function-declaration] ParMETIS_FusedElementGraph(vtxdist, xadj, vvol, vsurf, adjncy, vwgt, adjwgt, ^ parmgridgen.c:302:6: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph, &mgraph, LTERM); ^ parmgridgen.c:378:6: warning: implicit declaration of function 'MGridGenRefine' is invalid in C99 [-Wimplicit-function-declaration] MGridGenRefine(nvtxs, mgraph->xadj, mgraph->vvol, mgraph->vsurf, mgraph->adjncy, ^ parmgridgen.c:423:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&vwgt, &oradjncy2, &graph, &mgraph, LTERM); ^ parmgridgen.c:614:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph->vtxdist, &graph->xadj, &graph->adjncy, &graph->adjwgt, &graph->vvol, ^ 7 warnings generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c grsetup.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c move.c move.c:241:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&newlabel, &realcore, LTERM); ^ 1 warning generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I./ -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c ikeysort.c ar rv ../../libparmgrid.a comm.o util.o memory.o debug.o setup.o parmgridgen.o grsetup.o move.o ikeysort.o ../IMParMetis-2.0/ParMETISLib/fused.o ../IMParMetis-2.0/ParMETISLib/comm.o ../IMParMetis-2.0/ParMETISLib/util.o ../IMParMetis-2.0/ParMETISLib/memory.o ../IMParMetis-2.0/ParMETISLib/debug.o ../IMParMetis-2.0/ParMETISLib/setup.o ../IMParMetis-2.0/ParMETISLib/diffuse.o ../IMParMetis-2.0/ParMETISLib/grsetup.o ../IMParMetis-2.0/ParMETISLib/timer.o ../IMParMetis-2.0/ParMETISLib/coarsen.o ../IMParMetis-2.0/ParMETISLib/edge_refine.o ../IMParMetis-2.0/ParMETISLib/drivers.o ../IMParMetis-2.0/ParMETISLib/remap.o ../IMParMetis-2.0/ParMETISLib/iidxsort.o ../IMParMetis-2.0/ParMETISLib/ikeysort.o ../IMParMetis-2.0/ParMETISLib/var.o ar: warning: creating ../../libparmgrid.a a - comm.o a - util.o a - memory.o a - debug.o a - setup.o a - parmgridgen.o a - grsetup.o a - move.o a - ikeysort.o a - ../IMParMetis-2.0/ParMETISLib/fused.o a - ../IMParMetis-2.0/ParMETISLib/comm.o a - ../IMParMetis-2.0/ParMETISLib/util.o a - ../IMParMetis-2.0/ParMETISLib/memory.o a - ../IMParMetis-2.0/ParMETISLib/debug.o a - ../IMParMetis-2.0/ParMETISLib/setup.o a - ../IMParMetis-2.0/ParMETISLib/diffuse.o a - ../IMParMetis-2.0/ParMETISLib/grsetup.o a - ../IMParMetis-2.0/ParMETISLib/timer.o a - ../IMParMetis-2.0/ParMETISLib/coarsen.o a - ../IMParMetis-2.0/ParMETISLib/edge_refine.o a - ../IMParMetis-2.0/ParMETISLib/drivers.o a - ../IMParMetis-2.0/ParMETISLib/remap.o a - ../IMParMetis-2.0/ParMETISLib/iidxsort.o a - ../IMParMetis-2.0/ParMETISLib/ikeysort.o a - ../IMParMetis-2.0/ParMETISLib/var.o ar -ts ../../libparmgrid.a comm.o util.o memory.o debug.o setup.o parmgridgen.o grsetup.o move.o ikeysort.o fused.o comm.o util.o memory.o debug.o setup.o diffuse.o grsetup.o timer.o coarsen.o edge_refine.o drivers.o remap.o iidxsort.o ikeysort.o var.o gmake[2]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/ParLib' (cd Programs ; gmake ) gmake[2]: Entering directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/Programs' cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I../ParLib -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c main.c cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I../ParLib -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c parmgridgen.c parmgridgen.c:57:3: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&graph.vtxdist, &graph.xadj, &graph.vvol, &graph.vsurf, &graph.vwgt, ^ 1 warning generated. cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I../ParLib -I../../MGridGen/IMlib -I/usr/local/include -I/usr/local/mpi/openmpi/include -c io.c io.c:139:5: warning: implicit declaration of function 'IMfree' is invalid in C99 [-Wimplicit-function-declaration] IMfree(&gxadj, &gvvol, &gvsurf, &gadjncy, &gadjwgt, LTERM); ^ io.c:175:31: warning: format specifies type 'float *' but the argument has type 'double *' [-Wformat] fscanf(fpin, "%e ", txyz+k*ndims+j); ~~ ^~~~~~~~~~~~~~ %le 2 warnings generated. cc -o ../../parmgridgen main.o parmgridgen.o io.o -L../.. -L/usr/lib/ -L//usr/local/lib/ -L//usr/local/mpi/openmpi/lib -lparmgrid -lmgrid -lmpi -lm -pthread chmod 744 ../../parmgridgen gmake[2]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen/Programs' gmake[1]: Leaving directory '/wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/ParMGridGen' =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for parmgridgen-1.0_17 ===> Generating temporary packing list install -s -m 555 /wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/mgridgen /wrkdirs/usr/ports/math/parmgridgen/work/stage/usr/local/bin/mgridgen install -s -m 555 /wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/parmgridgen /wrkdirs/usr/ports/math/parmgridgen/work/stage/usr/local/bin/parmgridgen install -m 0644 /wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/libmgrid.a /wrkdirs/usr/ports/math/parmgridgen/work/stage/usr/local/lib/libmgrid.a install -m 0644 /wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/libparmgrid.a /wrkdirs/usr/ports/math/parmgridgen/work/stage/usr/local/lib/libparmgrid.a install -m 0644 /wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/mgridgen.h /wrkdirs/usr/ports/math/parmgridgen/work/stage/usr/local/include/mgridgen.h install -m 0644 /wrkdirs/usr/ports/math/parmgridgen/work/ParMGridGen-1.0/README /wrkdirs/usr/ports/math/parmgridgen/work/stage/usr/local/share/doc/parmgridgen/README ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2024-04-01T10:08:38+0000' 'PKG_NOTE_ports_top_git_hash=c2c35d895e' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=9eba6162f8' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.99.20240122_1' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for parmgridgen-1.0_17 ===> Building parmgridgen-1.0_17 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for parmgridgen-1.0_17 build of math/parmgridgen | parmgridgen-1.0_17 ended at Mon Apr 1 11:09:30 BST 2024 build time: 00:00:53