=>> Building science/h5utils build started at Tue Apr 2 12:43:26 BST 2024 port directory: /usr/ports/science/h5utils package name: h5utils-1.13.2_3 building for: FreeBSD pkg-builder.dan.net.uk 13.2-RELEASE-p10 FreeBSD 13.2-RELEASE-p10 amd64 maintained by: eduardo@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1173 Feb 1 08:45 /usr/ports/science/h5utils/Makefile Ports top last git commit: c2c35d895e Ports top unclean checkout: yes Port dir last git commit: 7aae4b5136 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.99.20240122_1 Host OSVERSION: 1400097 Jail OSVERSION: 1302001 Job Id: 03 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1302001 UNAME_v=FreeBSD 13.2-RELEASE-p10 UNAME_r=13.2-RELEASE-p10 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.99.20240122_1 MASTERMNT=/usr/local/poudriere/data/.m/13-amd64-default-dan/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/13-amd64-default-dan/03/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=13-amd64-default-dan SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/13-amd64-default-dan/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.99.20240122_1 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for h5utils-1.13.2_3: OCTAVE=off: With Octave support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- eduardo@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --without-octave --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/h5utils/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/h5utils/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/h5utils/work/.cache HOME=/wrkdirs/usr/ports/science/h5utils/work TMPDIR="/tmp" PATH=/ccache/libexec/ccache:/wrkdirs/usr/ports/science/h5utils/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/h5utils/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh DEFAULT_AUTOCONF=2.72 CMAKE_PREFIX_PATH="/usr/local" CCACHE_DIR="/root/.ccache" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/h5utils/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/h5utils/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/h5utils/work/.cache HOME=/wrkdirs/usr/ports/science/h5utils/work TMPDIR="/tmp" PATH=/ccache/libexec/ccache:/wrkdirs/usr/ports/science/h5utils/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/h5utils/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DEFAULT_AUTOCONF=2.72 PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -std=c++11 -isystem /usr/local/include " CCACHE_DIR="/root/.ccache" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OCTAVE="@comment " NO_OCTAVE="" OSREL=13.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/h5utils" EXAMPLESDIR="share/examples/h5utils" DATADIR="share/h5utils" WWWDIR="www/h5utils" ETCDIR="etc/h5utils" --End PLIST_SUB-- --SUB_LIST-- OCTAVE="@comment " NO_OCTAVE="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/h5utils DOCSDIR=/usr/local/share/doc/h5utils EXAMPLESDIR=/usr/local/share/examples/h5utils WWWDIR=/usr/local/www/h5utils ETCDIR=/usr/local/etc/h5utils --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### CCACHE_CPP2=1 WITH_SSP_PORTS=yes WITH_SSP=yes #WITH_LTO=yes DISABLE_LICENSES=yes LICENSES_ACCEPTED=AGPLv3 APACHE10 APACHE11 APACHE20 ART10 ARTPERL10 ART20 BSD BSD2CLAUSE BSD3CLAUSE BSD4CLAUSE BSL CC0-1.0 CDDL ClArtistic EPL GFDL GMGPL GPLv1 GPLv2 GPLv3 GPLv3RLE ISCL LGPL20 LGPL21 LGPL3 LPPL10 LPPL11 LPPL12 LPPL13 LPPL13a LPPL13b LPPL13c MIT MPL OpenSSL OFL10 OFL11 OWL PostgreSQL PHP202 PHP30 PHP301 PSFL RUBY ZLIB ZPL21 SVM-Light EULA ALASIR Microsoft-exFAT SIMIAN UDEVGAME unknown MTA COMMERCIAL teamspeak NO_LICENSES_DIALOGS=yes #### #### NO_IGNORE=yes DEFAULT_VERSIONS+=ssl=openssl mysql=8.0 imagemagick=7 samba=4.13 java=18 WITH_SETID_MODE=force PHP_ZTS=enabled OPTIONS_UNSET+=OPENJPEG OPTIONS_UNSET+=GSSAPI_BASE OPTIONS_SET+=ZTS OPTIONS_SET+=GSSAPI_NONE WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache NO_CCACHE_DEPEND=1 CCACHE_WRAPPER_PATH= /ccache/libexec/ccache #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> h5utils-1.13.2_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.20.9_1.pkg [pkg-builder.dan.net.uk] Installing pkg-1.20.9_1... [pkg-builder.dan.net.uk] Extracting pkg-1.20.9_1: .......... done ===> h5utils-1.13.2_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of h5utils-1.13.2_3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by h5utils-1.13.2_3 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by h5utils-1.13.2_3 for building => SHA256 Checksum OK for h5utils-1.13.2.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Fetching all distfiles required by h5utils-1.13.2_3 for building ===> Extracting for h5utils-1.13.2_3 => SHA256 Checksum OK for h5utils-1.13.2.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for h5utils-1.13.2_3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> h5utils-1.13.2_3 depends on executable: gawk - not found ===> Installing existing package /packages/All/gawk-5.3.0.pkg [pkg-builder.dan.net.uk] Installing gawk-5.3.0... [pkg-builder.dan.net.uk] `-- Installing gettext-runtime-0.22.3_1... [pkg-builder.dan.net.uk] | `-- Installing indexinfo-0.3.1... [pkg-builder.dan.net.uk] | `-- Extracting indexinfo-0.3.1: . done [pkg-builder.dan.net.uk] `-- Extracting gettext-runtime-0.22.3_1: .......... done [pkg-builder.dan.net.uk] `-- Installing gmp-6.3.0... [pkg-builder.dan.net.uk] `-- Extracting gmp-6.3.0: .......... done [pkg-builder.dan.net.uk] `-- Installing mpfr-4.2.1,1... [pkg-builder.dan.net.uk] `-- Extracting mpfr-4.2.1,1: .......... done [pkg-builder.dan.net.uk] `-- Installing readline-8.2.10... [pkg-builder.dan.net.uk] `-- Extracting readline-8.2.10: .......... done [pkg-builder.dan.net.uk] Extracting gawk-5.3.0: .......... done ===> h5utils-1.13.2_3 depends on executable: gawk - found ===> Returning to build of h5utils-1.13.2_3 ===> h5utils-1.13.2_3 depends on package: autoconf>=2.72 - not found ===> Installing existing package /packages/All/autoconf-2.72.pkg [pkg-builder.dan.net.uk] Installing autoconf-2.72... [pkg-builder.dan.net.uk] `-- Installing autoconf-switch-20220527... [pkg-builder.dan.net.uk] `-- Extracting autoconf-switch-20220527: ....... done [pkg-builder.dan.net.uk] `-- Installing m4-1.4.19_1,1... [pkg-builder.dan.net.uk] | `-- Installing libsigsegv-2.14... [pkg-builder.dan.net.uk] | `-- Extracting libsigsegv-2.14: ..... done [pkg-builder.dan.net.uk] `-- Extracting m4-1.4.19_1,1: .......... done [pkg-builder.dan.net.uk] `-- Installing perl5-5.36.3_1... [pkg-builder.dan.net.uk] `-- Extracting perl5-5.36.3_1: .......... done [pkg-builder.dan.net.uk] Extracting autoconf-2.72: .......... done ===== Message from libsigsegv-2.14: -- Note that the stackoverflow handling functions of this library need procfs mounted on /proc. ===> h5utils-1.13.2_3 depends on package: autoconf>=2.72 - found ===> Returning to build of h5utils-1.13.2_3 ===> h5utils-1.13.2_3 depends on package: automake>=1.16.5 - not found ===> Installing existing package /packages/All/automake-1.16.5_1.pkg [pkg-builder.dan.net.uk] Installing automake-1.16.5_1... [pkg-builder.dan.net.uk] Extracting automake-1.16.5_1: .......... done ===> h5utils-1.13.2_3 depends on package: automake>=1.16.5 - found ===> Returning to build of h5utils-1.13.2_3 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> h5utils-1.13.2_3 depends on shared library: libdf.so - not found ===> Installing existing package /packages/All/hdf-4.2.15_4,1.pkg [pkg-builder.dan.net.uk] Installing hdf-4.2.15_4,1... [pkg-builder.dan.net.uk] `-- Installing gcc13-13.2.0_4... [pkg-builder.dan.net.uk] | `-- Installing binutils-2.40_5,1... [pkg-builder.dan.net.uk] | | `-- Installing zstd-1.5.5_1... [pkg-builder.dan.net.uk] | | `-- Installing liblz4-1.9.4_1,1... [pkg-builder.dan.net.uk] | | `-- Extracting liblz4-1.9.4_1,1: .......... done [pkg-builder.dan.net.uk] | | `-- Extracting zstd-1.5.5_1: .......... done [pkg-builder.dan.net.uk] | `-- Extracting binutils-2.40_5,1: .......... done [pkg-builder.dan.net.uk] | `-- Installing mpc-1.3.1_1... [pkg-builder.dan.net.uk] | `-- Extracting mpc-1.3.1_1: ...... done [pkg-builder.dan.net.uk] `-- Extracting gcc13-13.2.0_4: .......... done create symlink for gcc13 create symlink for gcc13 (world) create symlink for g++13 create symlink for g++13 (world) create symlink for cpp13 create symlink for cpp13 (world) [pkg-builder.dan.net.uk] `-- Installing jpeg-turbo-3.0.2... [pkg-builder.dan.net.uk] `-- Extracting jpeg-turbo-3.0.2: .......... done [pkg-builder.dan.net.uk] `-- Installing libaec-1.1.2... [pkg-builder.dan.net.uk] `-- Extracting libaec-1.1.2: .......... done [pkg-builder.dan.net.uk] Extracting hdf-4.2.15_4,1: .......... done ===== Message from gcc13-13.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from hdf-4.2.15_4,1: -- ===> NOTICE: The hdf port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> h5utils-1.13.2_3 depends on shared library: libdf.so - found (/usr/local/lib/libdf.so) ===> Returning to build of h5utils-1.13.2_3 ===> h5utils-1.13.2_3 depends on shared library: libhdf5.so - not found ===> Installing existing package /packages/All/hdf5-1.12.2_2,1.pkg [pkg-builder.dan.net.uk] Installing hdf5-1.12.2_2,1... [pkg-builder.dan.net.uk] Extracting hdf5-1.12.2_2,1: .......... done ===> h5utils-1.13.2_3 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) ===> Returning to build of h5utils-1.13.2_3 ===> h5utils-1.13.2_3 depends on shared library: libmatheval.so - not found ===> Installing existing package /packages/All/libmatheval-1.1.11_5.pkg [pkg-builder.dan.net.uk] Installing libmatheval-1.1.11_5... [pkg-builder.dan.net.uk] `-- Installing guile1-1.8.8_2... [pkg-builder.dan.net.uk] | `-- Installing guile-aclocal-3.0.9_2... [pkg-builder.dan.net.uk] | `-- Extracting guile-aclocal-3.0.9_2: . done [pkg-builder.dan.net.uk] | `-- Installing libltdl-2.4.7... [pkg-builder.dan.net.uk] | `-- Extracting libltdl-2.4.7: ......... done [pkg-builder.dan.net.uk] `-- Extracting guile1-1.8.8_2: .......... done [pkg-builder.dan.net.uk] Extracting libmatheval-1.1.11_5: ....... done ===> h5utils-1.13.2_3 depends on shared library: libmatheval.so - found (/usr/local/lib/libmatheval.so) ===> Returning to build of h5utils-1.13.2_3 ===> h5utils-1.13.2_3 depends on shared library: libpng.so - not found ===> Installing existing package /packages/All/png-1.6.43.pkg [pkg-builder.dan.net.uk] Installing png-1.6.43... [pkg-builder.dan.net.uk] Extracting png-1.6.43: .......... done ===> h5utils-1.13.2_3 depends on shared library: libpng.so - found (/usr/local/lib/libpng.so) ===> Returning to build of h5utils-1.13.2_3 ===> h5utils-1.13.2_3 depends on shared library: libjpeg.so - found (/usr/local/lib/libjpeg.so) =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for h5utils-1.13.2_3 configure.ac:6: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:6: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:781: AM_CONFIG_HEADER is expanded from... configure.ac:6: the top level configure: loading site script /usr/ports/Templates/config.site checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether cc accepts -g... yes checking for cc option to enable C11 features... none needed checking whether cc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of cc... gcc3 checking for sin in -lm... yes checking for snprintf... (cached) yes checking for inflate in -lz... yes checking for png_create_write_struct in -lpng... yes checking for evaluator_get_variables in -lmatheval... yes checking for h4toh5... no checking for h5toh4... no checking for jpeg_start_compress in -ljpeg... yes checking for DFSDgetdata in -ldf... yes checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for hdf.h... yes checking for hdf/hdf.h... no checking for H5Fopen in -lhdf5... yes checking for v5dCreate in -lv5d... no checking for vis5d/v5d.h... no checking for vis5d+/v5d.h... no checking for arpa/inet.h... (cached) yes checking for netinet/in.h... (cached) yes checking for stdint.h... (cached) yes checking for inttypes.h... (cached) yes checking for uint16_t... yes checking for uint32_t... yes checking for htons... yes checking size of float... 4 checking for htonl... yes checking for wordexp.h... yes checking for wordexp... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating doc/man/h5topng.1 config.status: creating config.h config.status: executing depfiles commands =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for h5utils-1.13.2_3 /usr/bin/make all-am cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5totxt.o -MD -MP -MF .deps/h5totxt.Tpo -c -o h5totxt.o h5totxt.c mv -f .deps/h5totxt.Tpo .deps/h5totxt.Po cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT arrayh5.o -MD -MP -MF .deps/arrayh5.Tpo -c -o arrayh5.o arrayh5.c mv -f .deps/arrayh5.Tpo .deps/arrayh5.Po cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5utils.o -MD -MP -MF .deps/h5utils.Tpo -c -o h5utils.o h5utils.c mv -f .deps/h5utils.Tpo .deps/h5utils.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h5totxt h5totxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm -L/usr/local/lib cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5fromtxt.o -MD -MP -MF .deps/h5fromtxt.Tpo -c -o h5fromtxt.o h5fromtxt.c mv -f .deps/h5fromtxt.Tpo .deps/h5fromtxt.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h5fromtxt h5fromtxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm -L/usr/local/lib cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5tovtk.o -MD -MP -MF .deps/h5tovtk.Tpo -c -o h5tovtk.o h5tovtk.c mv -f .deps/h5tovtk.Tpo .deps/h5tovtk.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h5tovtk h5tovtk.o arrayh5.o h5utils.o -lhdf5 -lz -lm -L/usr/local/lib cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h4fromh5.o -MD -MP -MF .deps/h4fromh5.Tpo -c -o h4fromh5.o h4fromh5.c mv -f .deps/h4fromh5.Tpo .deps/h4fromh5.Po cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT arrayh4.o -MD -MP -MF .deps/arrayh4.Tpo -c -o arrayh4.o arrayh4.c mv -f .deps/arrayh4.Tpo .deps/arrayh4.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h4fromh5 h4fromh5.o arrayh4.o arrayh5.o h5utils.o -ldf -ljpeg -lhdf5 -lz -lm -L/usr/local/lib cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5fromh4.o -MD -MP -MF .deps/h5fromh4.Tpo -c -o h5fromh4.o h5fromh4.c mv -f .deps/h5fromh4.Tpo .deps/h5fromh4.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h5fromh4 h5fromh4.o arrayh4.o arrayh5.o h5utils.o -ldf -ljpeg -lhdf5 -lz -lm -L/usr/local/lib cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5math.o -MD -MP -MF .deps/h5math.Tpo -c -o h5math.o h5math.c mv -f .deps/h5math.Tpo .deps/h5math.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h5math h5math.o arrayh5.o h5utils.o -lmatheval -lhdf5 -lz -lm -L/usr/local/lib cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5topng.o -MD -MP -MF .deps/h5topng.Tpo -c -o h5topng.o h5topng.c mv -f .deps/h5topng.Tpo .deps/h5topng.Po cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT writepng.o -MD -MP -MF .deps/writepng.Tpo -c -o writepng.o writepng.c mv -f .deps/writepng.Tpo .deps/writepng.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h5topng h5topng.o writepng.o arrayh5.o h5utils.o -lpng -lhdf5 -lz -lm -L/usr/local/lib cc -DHAVE_CONFIG_H -I. -isystem /usr/local/include -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT h5cyl2cart.o -MD -MP -MF .deps/h5cyl2cart.Tpo -c -o h5cyl2cart.o h5cyl2cart.c mv -f .deps/h5cyl2cart.Tpo .deps/h5cyl2cart.Po cc -O2 -pipe -pthread -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fstack-protector-strong -o h5cyl2cart h5cyl2cart.o arrayh5.o h5utils.o -lhdf5 -lz -lm -L/usr/local/lib =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for h5utils-1.13.2_3 ===> Generating temporary packing list /bin/mkdir -p '/wrkdirs/usr/ports/science/h5utils/work/stage/usr/local/bin' install -s -m 555 h5totxt h5fromtxt h5tovtk h4fromh5 h5fromh4 h5math h5topng '/wrkdirs/usr/ports/science/h5utils/work/stage/usr/local/bin' /bin/mkdir -p '/wrkdirs/usr/ports/science/h5utils/work/stage/usr/local/share/man/man1' install -m 0644 doc/man/h5totxt.1 doc/man/h5fromtxt.1 doc/man/h5tovtk.1 doc/man/h5fromh4.1 doc/man/h5math.1 doc/man/h5topng.1 '/wrkdirs/usr/ports/science/h5utils/work/stage/usr/local/share/man/man1' /bin/mkdir -p '/wrkdirs/usr/ports/science/h5utils/work/stage/usr/local/share/h5utils' /bin/mkdir -p '/wrkdirs/usr/ports/science/h5utils/work/stage/usr/local/share/h5utils/colormaps' install -m 0644 colormaps/autumn colormaps/bluered colormaps/bone colormaps/colorcube colormaps/cool colormaps/copper colormaps/flag colormaps/gray colormaps/green colormaps/hot colormaps/hsv colormaps/jet colormaps/lines colormaps/pink colormaps/prism colormaps/spring colormaps/summer colormaps/vga colormaps/winter colormaps/yarg colormaps/yellow colormaps/dkbluered colormaps/viridis colormaps/inferno colormaps/RdBu colormaps/BrBG '/wrkdirs/usr/ports/science/h5utils/work/stage/usr/local/share/h5utils/colormaps' ====> Compressing man pages (compress-man) =========================================================================== =================================================== ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2024-04-02T11:43:26+0000' 'PKG_NOTE_ports_top_git_hash=c2c35d895e' 'PKG_NOTE_ports_top_checkout_unclean=yes' 'PKG_NOTE_port_git_hash=7aae4b5136' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.99.20240122_1' NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building packages for h5utils-1.13.2_3 ===> Building h5utils-1.13.2_3 =========================================================================== =>> Cleaning up wrkdir ===> Cleaning for h5utils-1.13.2_3 build of science/h5utils | h5utils-1.13.2_3 ended at Tue Apr 2 12:44:02 BST 2024 build time: 00:00:37